DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl4a

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_062059.1 Gene:Arl4a / 29308 RGDID:2152 Length:200 Species:Rattus norvegicus


Alignment Length:169 Identity:77/169 - (45%)
Similarity:111/169 - (65%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-----TYKNVKFNVWD 63
            :||.:...:...|::||||.|||||:||:|:..:.|.|:||.|||.|.:     ..|.|.|:.||
  Rat    11 ILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWD 75

  Fly    64 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPD 128
            ||||:|:||||:.|...|.|::||||..|.:|::||:||||:|....|.:...:||.||||||.:
  Rat    76 VGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRN 140

  Fly   129 AMKPHEIQEKLGLTRIRDRN-WYVQPSCATSGDGLSEGL 166
            ::...||::.|.:..:.... |::||:||..||||.|||
  Rat   141 SLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 77/169 (46%)
Arl4aNP_062059.1 Arl4_Arl7 18..200 CDD:206719 75/162 (46%)

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