DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf51F and arf-6

DIOPT Version :9

Sequence 1:NP_523751.2 Gene:Arf51F / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_503011.1 Gene:arf-6 / 191608 WormBaseID:WBGene00000184 Length:175 Species:Caenorhabditis elegans


Alignment Length:174 Identity:153/174 - (87%)
Similarity:164/174 - (94%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVG 65
            |||.||||||.||:||||||||||||||||||||||||||||||||||||||||||:||||||||
 Worm     1 MGKFLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVG 65

  Fly    66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAM 130
            |||||||||||||||||.||||:|.|||||:||||.|||||||||||::||||:|||||||.|||
 Worm    66 GQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAM 130

  Fly   131 KPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
            ||||||:|||||||||||||||||||::||||.|||.||:.|.|
 Worm   131 KPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWLSQNCK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf51FNP_523751.2 P-loop_NTPase 1..174 CDD:422963 152/172 (88%)
arf-6NP_503011.1 Arf6 5..172 CDD:206716 148/166 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 317 1.000 Domainoid score I682
eggNOG 1 0.900 - - E2759_KOG0071
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1256
Inparanoid 1 1.050 322 1.000 Inparanoid score I1484
Isobase 1 0.950 - 0 Normalized mean entropy S59
OMA 1 1.010 - - QHG53833
OrthoDB 1 1.010 - - D1362554at2759
OrthoFinder 1 1.000 - - FOG0000118
OrthoInspector 1 1.000 - - oto17236
orthoMCL 1 0.900 - - OOG6_103717
Panther 1 1.100 - - LDO PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R78
SonicParanoid 1 1.000 - - X4731
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.820

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