DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl1

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_080135.2 Gene:Arl1 / 104303 MGIID:99436 Length:181 Species:Mus musculus


Alignment Length:171 Identity:95/171 - (55%)
Similarity:126/171 - (73%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQD 68
            :.|.:||.:|||||:||||.||||||||:|::|:.||||||:|||||||||||:||.|||:|||.
Mouse     8 IFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQT 72

  Fly    69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPH 133
            .|||.||.||:.|..:|:|||..|||||..:::||..::.:.|:|.||:::||||||:..||.|.
Mouse    73 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPS 137

  Fly   134 EIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
            |:...|||..::||.|.:..:.||.|.||.|.:.||....|
Mouse   138 EMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 94/169 (56%)
Arl1NP_080135.2 Arl1 19..176 CDD:206718 89/156 (57%)

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