DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl13a

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:XP_004916817.1 Gene:arl13a / 100499404 XenbaseID:XB-GENE-1007191 Length:422 Species:Xenopus tropicalis


Alignment Length:177 Identity:50/177 - (28%)
Similarity:84/177 - (47%) Gaps:27/177 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KEMRILMLGLDAAGKTTILYKLKL---GQSVTTIPTVGFNVETVTYKNVKFNVWDV------GGQ 67
            :.:.|:.||||.|||::|:..::.   .|.:::.....|..|      ::.:.:|:      |||
 Frog    47 RPVTIIFLGLDNAGKSSIIRVIRRVPPCQVLSSAHVDPFRTE------IRLDRFDLTLLEMPGGQ 105

  Fly    68 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKP 132
             |.|..||.|||....|:||||.:|..|:.|....|..::....:....:||.|||||...::..
 Frog   106 -KNRASWRLYYTQAHALVFVVDASDPGRMKEVACVLASVLRHPCVAGKPLLILANKQDKSSSLLT 169

  Fly   133 HEIQEKLGLTRIRDRN---WYVQPSCATSGD-------GLSEGLIWL 169
            .||.|.|.|..:.:.|   ..::| |:...:       |:.:.|.|:
 Frog   170 SEIIELLSLETLVNENKTHCRIEP-CSAGAEFSSQHDWGVLKALRWV 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 50/177 (28%)
arl13aXP_004916817.1 P-loop containing Nucleoside Triphosphate Hydrolases 50..217 CDD:476819 50/174 (29%)

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