Sequence 1: | NP_725451.1 | Gene: | Xpc / 36697 | FlyBaseID: | FBgn0004698 | Length: | 1294 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011089.4 | Gene: | RAD4 / 856909 | SGDID: | S000000964 | Length: | 754 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 763 | Identity: | 181/763 - (23%) |
---|---|---|---|
Similarity: | 296/763 - (38%) | Gaps: | 212/763 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 641 LKEEYSEL---GLS-KKLLKPTLSSKLVLKSKNQS-SFSSNKSDTSFEENPSTSSSSKSLKEETA 700
Fly 701 KLSSSKLEDKKVASPAETKT-KVQSSLLKRVTTQNISESGDSKKPKVAPVDTFSPVAGRTRRATV 764
Fly 765 KPKTEEKPQVVGSPVIPKLMLSKVKQLNAKHSDTENASPANKHLQEQRN--TRETRSRSKSPKVL 827
Fly 828 ----------ISPSFLKKKSDGADSTSDPQKHQMAPETKARISPNFLSEALPARQLRSRGQKASS 882
Fly 883 LAIPQLDGGDDVPLPKKRPKLEKLKNSQDSDEVFEPAKPVKKA-----------PVLPKSVQNLR 936
Fly 937 KDRRVMSTD-----DEG--------------------GSRL----------NRKTDAS------- 959
Fly 960 -DM------WVEVWSDVEEQWICIDLFKGKLHCVDTIR---KNATPGLA--------YVFAFQDD 1006
Fly 1007 QSLKDVTARYCASWSTTVRKARVEK-----AWLDETI-APYLGRRTKRDITEDDQLRRIHSDKPL 1065
Fly 1066 PKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFIR-----GEA--VYS-RDCVHLLHSREIWL 1122
Fly 1123 KSARVVKLGEQPYKVVK---ARPKWDRLTRTVIKDQPLEIFGYWQTQEYEPPTAE-NGIVPRNAY 1183
Fly 1184 GNVELFKDCMLPKKTVHLRLPGLMRICKKLNIDCANAVVGFDFHQGA-CHPMYDGFIVCEEFREV 1247
Fly 1248 VTAAWEEDQQVQVLKEQEKYETRVYG---NWKKLIKGLLIRERLKKKY 1292 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Xpc | NP_725451.1 | rad4 | 345..1294 | CDD:273170 | 181/763 (24%) |
Rad4 | 925..1057 | CDD:281786 | 49/208 (24%) | ||
BHD_1 | 1062..1112 | CDD:214984 | 17/57 (30%) | ||
BHD_2 | 1115..1170 | CDD:214985 | 13/57 (23%) | ||
BHD_3 | 1178..1252 | CDD:198100 | 20/74 (27%) | ||
RAD4 | NP_011089.4 | RAD4 | 1..669 | CDD:227822 | 181/763 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157346536 | |
Domainoid | 1 | 1.000 | 44 | 1.000 | Domainoid score | I3157 |
eggNOG | 1 | 0.900 | - | - | E1_COG5535 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4422 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002146 | |
OrthoInspector | 1 | 1.000 | - | - | oto99109 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102113 | |
Panther | 1 | 1.100 | - | - | O | PTHR12135 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1099 |
SonicParanoid | 1 | 1.000 | - | - | X1843 | |
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.720 |