DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpm and trpm5

DIOPT Version :9

Sequence 1:NP_001097320.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2023 Species:Drosophila melanogaster
Sequence 2:XP_017212363.1 Gene:trpm5 / 557722 ZFINID:ZDB-GENE-060503-736 Length:1165 Species:Danio rerio


Alignment Length:1190 Identity:345/1190 - (28%)
Similarity:575/1190 - (48%) Gaps:189/1190 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 GTIEFQGGAHPTKAQYVRLSFDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIR 243
            |.|:|.|.:. |:.::||::..|.|..:.|:.||:|.|..|.|::.:.||.....|:..|:..:|
Zfish    18 GDIDFTGVSR-TRGKFVRVTSSTDPAEIYQILTKQWGLAPPHLVVALMGGDEVAQLKPWLRDTLR 81

  Fly   244 KGLLKAAKTTGAWIFTGGTNTGVTKQVGDALLLEGQQRTG---RVVSIGIAPWGIVERNHELLGH 305
            |||:|||::|||||.|.|...|:||.:|.|:.......|.   |||:||||||.:::....||..
Zfish    82 KGLVKAAQSTGAWILTSGLRFGITKNLGQAVRDHSLASTSPKVRVVAIGIAPWNMIQNRDLLLSA 146

  Fly   306 NREVPCHSISSPRSKL---AV--LNNRHAYFLLVDNGTQAKYGAELILRRKLEKFISNLKLHPFT 365
            .   |.|..:.|...|   ||  |:..|::|:|||...: :.||...:|.|:.|.||   |....
Zfish   147 K---PDHPATYPTEDLPYGAVYSLDCNHSHFILVDEDPK-RPGATGEMRVKMLKHIS---LQRTG 204

  Fly   366 HSST-----PVVCLVIEGGTNTIRAVLEYVTDSPPVPVVVCDGSGRAADLL-AFVHKYASDGEEQ 424
            :..|     ||:||::.|....::.:.:.:.:|  :|.::..|||..||:| ..:.:...|.   
Zfish   205 YGGTGSIEIPVLCLLVHGEPRILQKMYKNIQNS--IPWLILAGSGGVADILVTLMDRGCWDA--- 264

  Fly   425 PVLESMRDYLIGTIQKTFEVGLDQSE-----KLYQELLQCTRNKNLITVFRIQEKPEGEAQELDQ 484
               :.:::.||    .||..||..:|     ||.|.:|.   :.:|:||    ..||.:: |||.
Zfish   265 ---DIVQELLI----NTFPDGLHSTEITSWTKLIQRILD---HGHLLTV----HDPEQDS-ELDT 314

  Fly   485 TILTALFKSQHLSPPE------QLSLALTWNRVDIARSEIFVYGQEWPNGALDEAMMQALEHDRI 543
            .||.||.|:......|      :|.||:.|||||||:||||....:|....|:|.||:||.:|:.
Zfish   315 VILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSEIFSGDVQWSAQDLEEVMMEALVNDKP 379

  Fly   544 DFVKLLLENGVSMKKFLTIPRLEELY------NTKH---------------------GPANTLGY 581
            |||:|.::|||::|:|||..||:|||      |..|                     .|.|.|| 
Zfish   380 DFVRLFVDNGVNIKQFLTYGRLQELYCSVSEKNLLHTLLLKKNQERQAQLARKRMSGNPNNELG- 443

  Fly   582 ILRDVRPHIPKGYIYTLHDIGLVINKLMGGAYRSYYTRRKFRPIYAKVMNSYANACRKSSTYQYQ 646
                     .:.:.:|.|::..|:...:....:.:|.:..            |....|...:..|
Zfish   444 ---------DRKFRFTFHEVSKVLKDFLDDTCKGFYQKLP------------AERMGKGRLFHSQ 487

  Fly   647 RYAGANSLSLVTGLLPFTSEMALFEFPFNELLIWAVLTKRQQMALLMWTHGEEALAKSLVSCKLY 711
            :.            ||......  |.|:.:|.:||:|..||:||...|..|.||:|.:||.||:.
Zfish   488 KN------------LPDMDRRC--EHPWRDLFLWAILQNRQEMANYFWAMGPEAVAAALVGCKIM 538

  Fly   712 KAMAHEAAEDDLDTEIYEELRSYAK-EFESKGNKLLDFSYRQDAEKAQRLLTCELHSWSNQSCLS 775
            |.|||.|.|       .|..||... ::|.....|....|....::|..||..:...||..:.|:
Zfish   539 KEMAHLATE-------AESARSMKNAKYEQFAMDLFSECYSNSEDRAYSLLVRKTCCWSKATVLN 596

  Fly   776 LAVAANHRALLAHPCSQVILADLWMGGLRTRKNTNFKVILGLAMPFYIRQLDFKSKEELQQMPQT 840
            :|..|..:...||...|.:|..:|.|.:||..:     |..|.:.|:|..|.:.|..:.....|.
Zfish   597 IATLAEAKCFFAHDGVQALLTKVWWGAMRTDTS-----ISRLVLTFFIPPLVWTSLIKFNPEEQV 656

  Fly   841 EEEHLEN-QNLDNDDSDRSQPDAEALLADTYSVRDTKVHENGKVSLTDSDTAQFREFFNLSEYNE 904
            .::..|. ..||:.:::::     .||.|    .|....|....:...|.:|.|           
Zfish   657 SKDEGEPFAELDSLETEQA-----LLLTD----GDPVAGEGSAETAARSCSATF----------- 701

  Fly   905 VKQHQPLR-LKKKFYEFYTAPITKFWADSIAYMFFLIMFSFTVLVKMEQMPRW----QEWYSIAY 964
                  :| :.:::..|::||:|.|..:.|.|..|||:||:.:|:.....|.:    .|.....:
Zfish   702 ------IRVVLRRWNRFWSAPVTVFMGNVIMYFAFLILFSYVLLLDFRPPPPYGPSAAEIILYFW 760

  Fly   965 ITTLGFEKVRE-IISSEPVAITHKFSVWAWNMWNPCDGAAIILFVIGLAFRFRENTMDIGRVIYC 1028
            :.||..|::|: ..:.|.::|..|..::..:.||.||..||.|||:||:.|...:|.:.||.:..
Zfish   761 VFTLVLEEIRQSFFTDEDMSILKKMKLYVEDNWNKCDMVAISLFVVGLSCRMAMSTYEAGRTVLA 825

  Fly  1029 VDSIYWYLRILNILGVNKYLGPLVTMMGKMVKNMIYFVVLLAVVLMSFGVSRQAILYPNKQPTWS 1093
            :|.:.:.||:::|..::|.|||.:.::.:|:|::.:|:..|:|.|:::||:.||:|:||......
Zfish   826 LDFMVFTLRLIHIFAIHKQLGPKIIIVERMIKDVFFFLFFLSVWLIAYGVTTQALLHPNDPRIDW 890

  Fly  1094 LIKEVTFQPYFMLYGEVFAGDIDPP------CGEDPSQ------PGC--VTGHWVTPITMSMYLL 1144
            :.:...::||..::|::...:||..      |..|..:      |.|  :..:|:..:.:.:|||
Zfish   891 VFRRALYRPYLHIFGQIPLEEIDAAKMPDDNCTTDVQEIILGTLPPCPNIYANWLVILLLVIYLL 955

  Fly  1145 IANILLINLLIAVFNNIFNEVNSVSHQVWMFQRFTVVMEYQQKPVLPPPFIALCHFYSLLKYCVR 1209
            :.|:||:|||||:|:..|..|...:...|.|||:.:::||..:|.|.||||.:.|....|...::
Zfish   956 VTNVLLLNLLIAMFSYTFQVVQENADIFWKFQRYNLIVEYHSRPALAPPFIIISHITQALLSFIK 1020

  Fly  1210 KAKG----LEVQRDNGLKLFLEKDDLERLYDFEEECVEGFFHEQEIILNQSTDERVKNTTERVET 1270
            |.:.    ||.:..:||.        ::|..:|....|.:..:.|....:|:.||::.|:.:|:|
Zfish  1021 KTENTQDLLERELPSGLD--------QKLMTWETVQKENYLAKLEHEHRESSGERLRYTSSKVQT 1077

  Fly  1271 MSQKIEDINQKENIQTATVQ 1290
            :.:.:.....:|. :.|||:
Zfish  1078 LLRMVGGFKDQEK-RMATVE 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001097320.1 Ion_trans 951..1167 CDD:278921 69/234 (29%)
TRPM_tetra 1262..1313 CDD:293127 7/29 (24%)
trpm5XP_017212363.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579559
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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