DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trpm and gon-2

DIOPT Version :9

Sequence 1:NP_001097320.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2023 Species:Drosophila melanogaster
Sequence 2:NP_492315.4 Gene:gon-2 / 172646 WormBaseID:WBGene00001651 Length:2032 Species:Caenorhabditis elegans


Alignment Length:2023 Identity:660/2023 - (32%)
Similarity:969/2023 - (47%) Gaps:525/2023 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVVTDS-------PLAPHKYVRRISKDFSTVRRYSNTPAVVVGSFRASTSAFIAAESAAHLPTCS 58
            :.:||:       .|...:|::  ||....|...|.|.....|...|     :...|.|...|.:
 Worm   176 LAITDNKDDKLMKTLGVTRYLQ--SKGGDQVPPTSTTTGGAGGDGNA-----VPTTSQAQAQTFN 233

  Fly    59 SPTTRTPVSTPRGIRRRQRMRKRSSVSSTLSKVLILNVRDLLKAHAGSEPLKEHQPRSWIETNFQ 123
            |....|.:|:  |.|..:.:   |:.:::...||...:.:.::....:..|..|   :|:...|.
 Worm   234 SGRQTTGMSS--GDRLNEDV---SATANSAQLVLPTPLFNQMRFTESNMSLNRH---NWVRETFT 290

  Fly   124 KRECIKFIPCPKDDTKCCCGQAQITHQTIPGIES------------------------------- 157
            :|||.:||...:|..||.||:.:..|:.||.:.|                               
 Worm   291 RRECSRFIASSRDLHKCGCGRTRDAHRNIPELTSEFLRQKRSVAALEQQRSISNVNDDINTQNMY 355

  Fly   158 --GSPGDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLSFDTRPELLVQLFTKEWNLELPK 220
              ....:.|...|||....|:|:|.:|||||.||.||||||::|||.|..::.||...|.:..|:
 Worm   356 TKRGANEKWSLRKHTVSLATNAFGQVEFQGGPHPYKAQYVRVNFDTEPAYIMSLFEHVWQISPPR 420

  Fly   221 LLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIFTGGTNTGVTKQVGDALLLEGQQ--RTG 283
            |:|||.||.:|||||.||.:..||||||||.||||||.|.|.:|||.|.|  |..|||.|  :..
 Worm   421 LIITVHGGTSNFDLQPKLARVFRKGLLKAASTTGAWIITSGCDTGVVKHV--AAALEGAQSAQRN 483

  Fly   284 RVVSIGIAPWGIVERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELIL 348
            ::|.|||||||::::..:.:|.::.||.:. ||.:.:...|||||:|||||||||..:||||:||
 Worm   484 KIVCIGIAPWGLLKKREDFIGQDKTVPYYP-SSSKGRFTGLNNRHSYFLLVDNGTVGRYGAEVIL 547

  Fly   349 RRKLEKFIS-NLKLHPFTHSSTPVVCLVIEGGTNTIRAVLEYVTDSPPVPVVVCDGSGRAADLLA 412
            |::||.:|| ..|:...|. |.||||:|:|||:.|||:||:|||:.|.|||||||||||||||||
 Worm   548 RKRLEMYISQKQKIFGGTR-SVPVVCVVLEGGSCTIRSVLDYVTNVPRVPVVVCDGSGRAADLLA 611

  Fly   413 FVHKYASDGEEQPVLESMRDYLIGTIQKTFEVGLDQSEKLYQELLQCTRNKNLITVFRIQEKPEG 477
            |.|:..::....|  :.:|..::..::.||......:.:|..||..|.::|||:|:||:.|:.| 
 Worm   612 FAHQNVTEDGLLP--DDIRRQVLLLVETTFGCSEAAAHRLLHELTVCAQHKNLLTIFRLGEQGE- 673

  Fly   478 EAQELDQTILTALFKSQHLSPPEQLSLALTWNRVDIARSEIFVYGQEWPNGALDEAMMQALEHDR 542
              .::|..|||||.|.|:||..:||:|||.|||||||||::|..|.|||..||..|||:||.|||
 Worm   674 --HDVDHAILTALLKGQNLSAADQLALALAWNRVDIARSDVFAMGHEWPQAALHNAMMEALIHDR 736

  Fly   543 IDFVKLLLENGVSMKKFLTIPRLEELYNTKHGPANTLGYILRDVRPHIPKGYIYTLHDIGLVINK 607
            :|||:||||.|::|:|||||.||:|||||..||.|||.||:||| ..:.:||.:.|.||||||.|
 Worm   737 VDFVRLLLEQGINMQKFLTISRLDELYNTDKGPPNTLFYIVRDV-VRVRQGYRFKLPDIGLVIEK 800

  Fly   608 LMGGAYRSYYTRRKFRPIYAKVMNSYANACRKS-------------------STYQYQRYAGANS 653
            |||.:|:..||..:||..|.:.|....:|.:|:                   ||.......|.:|
 Worm   801 LMGNSYQCSYTTSEFRDKYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTEGMGGVGGGSS 865

  Fly   654 LSLVTG-------------------------------------------LLP------------F 663
            ::.|.|                                           :.|            |
 Worm   866 VAGVFGNSFGNQDPPLDPHVNRSALSGSRALSNHILWRSAFRGNFPANPMRPPNLGDSRDCGSEF 930

  Fly   664 TSEMAL------------FEFPFNELLIWAVLTKRQQMALLMWTHGEEALAKSLVSCKLYKAMAH 716
            ..|::|            |.:|::||:|||||||||.||:.||.|||||:||:||:|:|||::|.
 Worm   931 DEELSLTSASDGSQTEPDFRYPYSELMIWAVLTKRQDMAMCMWQHGEEAMAKALVACRLYKSLAT 995

  Fly   717 EAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYRQDAEKAQRLLTCELHSWSNQSCLSLAVAAN 781
            |||||.|:.||.|||:.||:||.....:|||..|..|..:..:|||.||.:|||::||:|||..|
 Worm   996 EAAEDYLEVEICEELKKYAEEFRILSLELLDHCYHVDDAQTLQLLTYELSNWSNETCLALAVIVN 1060

  Fly   782 HRALLAHPCSQVILADLWMGGLRTRKNTNFKVILGLAMPFYIRQLDFKSKEELQQMPQTEEEHLE 846
            ::..|||||.|::|||||.||||.|.::|.||:|||..|.:|:.|:||::|||...|||..||..
 Worm  1061 NKHFLAHPCCQILLADLWHGGLRMRTHSNIKVVLGLICPPFIQMLEFKTREELLNQPQTAAEHQN 1125

  Fly   847 NQNL-----------------------DNDDSDR------------SQPDAEAL-LADTYSVRDT 875
            :.|.                       |:||.:.            ||..|::| :...:..|..
 Worm  1126 DMNYSSSSSSSSSSSSSSSSSDSSSFEDDDDENNAHNHDQKRTRKTSQGSAQSLNITSLFHSRRR 1190

  Fly   876 KVHENGKVSL-TDSD--------------TAQFREFF---------------------------- 897
            |..:|.|... ||:.              ||::..|.                            
 Worm  1191 KAKKNEKCDRETDASACEAGNRQIQNGGLTAEYGTFGESNGVSPPPPYMRANSRSRYNNRSDMSK 1255

  Fly   898 ----------NLSEY-----------NEVKQHQ---PLRLKKKFYEFYTAPITKFWADSIAYMFF 938
                      |||:.           |.::|.|   .::::::|||||:|||:.||:.:|:::.|
 Worm  1256 TSSVIFGSDPNLSKLQKSNITSTDRPNPMEQFQGTRKIKMRRRFYEFYSAPISTFWSWTISFILF 1320

  Fly   939 LIMFSFTVLVKMEQMPRWQEWYSIAYITTLGFEKVREIISSEPVAITHKFSVWAWNMWNPCDGAA 1003
            :..|::|:|||....|...|:..|||:...|.|:||:||.|:......|...:..:.||.....|
 Worm  1321 ITFFTYTLLVKTPPRPTVIEYILIAYVAAFGLEQVRKIIMSDAKPFYEKIRTYVCSFWNCVTILA 1385

  Fly  1004 IILFVIGLAFR-FRENTMDIGRVIYCVDSIYWYLRILNILGVNKYLGPLVTMMGKMVKNMIYFVV 1067
            ||.:::|...| |  .::..||||...||:.|.:::|:.:.|:..|||.|||.|||::||.|.:|
 Worm  1386 IIFYIVGFFMRCF--GSVAYGRVILACDSVLWTMKLLDYMSVHPKLGPYVTMAGKMIQNMSYIIV 1448

  Fly  1068 LLAVVLMSFGVSRQAILYPNKQPTWSLIKEVTFQPYFMLYGEVFAGDIDPPCGED---------- 1122
            :|.|.|:|||::||:|.||::...|.|::.:..:|||||||||:|.:|| .||::          
 Worm  1449 MLVVTLLSFGLARQSITYPDETWHWILVRNIFLKPYFMLYGEVYADEID-TCGDEAWDQHLENGG 1512

  Fly  1123 PSQPG-------CVTGHWVTPITMSMYLLIANILLINLLIAVFNNIFNEVNSVSHQVWMFQRFTV 1180
            |...|       ||.|:|:.|:.|:.:||||||||:::|||:||:||:..:.:|.|:|:|||:..
 Worm  1513 PVILGNGTTGLSCVPGYWIPPLLMTFFLLIANILLMSMLIAIFNHIFDATDEMSQQIWLFQRYKQ 1577

  Fly  1181 VMEYQQKPVLPPPFIALCHFYSLLKYCVR------KAKGLEVQRDNGLKLFLEKDDLERLYDFEE 1239
            ||||:..|.||||...|.|...:|:: ||      |::......|..|||||:.|.:|:|:||||
 Worm  1578 VMEYESTPFLPPPLTPLYHGVLILQF-VRTRLSCSKSQERNPMFDFSLKLFLDNDQIEKLHDFEE 1641

  Fly  1240 ECVEGFFHEQEIILNQSTDERVKNTTERVETMSQKIEDINQKENIQTATVQNIEFRLRKMEESSE 1304
            :|:|....::....|.|.::|:.....|.:.:..::.|:..||::....:.::|.||..:|::..
 Worm  1642 DCMEDLARQKLNEKNTSNEQRILRADIRTDQILNRLIDLQAKESMGRDVINDVESRLASVEKAQN 1706

  Fly  1305 QILSHLAVIHRFMSTHTAGADDLRGSTINIPGEMQRMRTISISDTEGGSGPGGNGGGGGGGGAIV 1369
            :||..:..:                                                        
 Worm  1707 EILECVRAL-------------------------------------------------------- 1715

  Fly  1370 PLGLGAGLNLNSLQVTTRRRFNRSLTEVRPDAYIFDEGTHFEVVPLPEEPDEVVKSREALNEQVV 1434
                   ||.|:......|.|:.|                         ||.:|           
 Worm  1716 -------LNQNNAPTAIGRCFSPS-------------------------PDPLV----------- 1737

  Fly  1435 RKASMQSEADSDIYIPVSQRPSTCETVKRTPYVTVRQDTGAS--TESKDTLTPMGNNDDDQTLVG 1497
                                    ||...||...:.:..|..  .|.||       :|      .
 Worm  1738 ------------------------ETANGTPGPLLLKLPGTDPILEEKD-------HD------S 1765

  Fly  1498 GDNSDDATPDINFEAARHRALRQRTVSLC------RRNSETYSLTGADINRSHISLNQLASLSRR 1556
            |:||:...|.        |..|.||.::|      .||....|...:|::    .:.|     :|
 Worm  1766 GENSNSLPPG--------RIRRNRTATICGGYVSEERNMMLLSPKPSDVS----GIPQ-----QR 1813

  Fly  1557 QMSLTQSEPDSDKDAPIAQGSAHPGKSVLHAKPSRNILLKLHSEYTSITDEL------------- 1608
            .||:|..:|     .|:..           ||.|...:.:.|.|||||||.:             
 Worm  1814 LMSVTSMDP-----LPLPL-----------AKLSTMSIRRRHEEYTSITDSIAIRHPERRIRNNR 1862

  Fly  1609 -------------ESVCHMIASP----TVSL---PSNKA----------SLDRPKTEMSRAEAAA 1643
                         |...::.:||    |..|   ||::.          .:|.|:.|...|:|  
 Worm  1863 SNSSEHDESAVDSEGGGNVTSSPRKRSTRDLRMTPSSQVEESTSRDQIFEIDHPEHEEDEAQA-- 1925

  Fly  1644 LLEKKHLKECEENDYMILEGLIESRGSIDASAQGFEIGVSIDYSHRYPLRRETAVELSPSKPSVD 1708
                    :||..|.:..|         :...:..|...|.:..|.:|.|:.:.....||. :::
 Worm  1926 --------DCELTDVITEE---------EDEEEDDEEDDSHERHHIHPRRKSSRQNRQPSH-TLE 1972

  Fly  1709 GDLMGGGE 1716
            .||..|.|
 Worm  1973 TDLSEGEE 1980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001097320.1 Ion_trans 951..1167 CDD:278921 93/233 (40%)
TRPM_tetra 1262..1313 CDD:293127 10/50 (20%)
gon-2NP_492315.4 7TMR-DISM_7TM <1299..1462 CDD:284997 66/164 (40%)
Ion_trans 1328..1567 CDD:278921 96/241 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166604
Domainoid 1 1.000 452 1.000 Domainoid score I257
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1031 1.000 Inparanoid score I138
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323456at33208
OrthoFinder 1 1.000 - - FOG0002675
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101222
Panther 1 1.100 - - LDO PTHR13800
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2859
SonicParanoid 1 1.000 - - X538
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.020

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