DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpm and trpm4b.1

DIOPT Version :9

Sequence 1:NP_001097320.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2023 Species:Drosophila melanogaster
Sequence 2:XP_009304689.1 Gene:trpm4b.1 / 102659287 ZFINID:ZDB-GENE-061214-3 Length:1226 Species:Danio rerio


Alignment Length:1304 Identity:371/1304 - (28%)
Similarity:648/1304 - (49%) Gaps:180/1304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ILNVRDLLKAHAGSEPLKEHQPRSWIETNFQKRECIKFIPCPKDDT-----KCCCGQAQITHQTI 152
            ::|.:|:.:......|..:   .|||.:.|:||.|..|:    :|:     :|.||.|:..|.::
Zfish     1 MMNEKDIEEGEVAVMPKTD---LSWIPSFFKKRVCTTFV----EDSLSNGGRCQCGAARDNHPSV 58

  Fly   153 PGIESGSPGD--------LWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLSFDTRPELLVQL 209
                  :.||        .||.|:||..|||||||.:|| .||....:.::|||..|.|..:..|
Zfish    59 ------ALGDNFSTAVVSQWLSTQHTSEQPTDAYGDLEF-AGAGKRHSYFLRLSNTTDPARVFDL 116

  Fly   210 FTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIFTGGTNTGVTKQVGDAL 274
            ..:.|.|..|.|:::|.||:...::::.::..:|:||:|||::|||||.|||...|:::.:|:|:
Zfish   117 MKEHWKLPQPSLVLSVVGGEGRSEVKSWVRDILRQGLVKAAQSTGAWIITGGLRQGISRCIGEAV 181

  Fly   275 ----LLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPC-HSISSPRSKLAVLNNRHAYFLLV 334
                .........:|:.|||||||::....:|:......|. :.:.:...:...|:|.|..||||
Zfish   182 KDNATAVSSITLNKVLPIGIAPWGLLGNRQQLVNSEGSFPARYMVRNISPEYCYLDNNHKAFLLV 246

  Fly   335 DNGTQAKYGAELILRRKLEKFISNLKLHPFTHS-STPVVCLVIEGGTNTIRAVLEYVTDS--PPV 396
            |:||....|.||..|.:||.:||:.:  |...| ..||:.::|.|.|    ::||::..|  ...
Zfish   247 DDGTTRHKGGELAFRARLEDYISHQR--PGGASIDIPVLNMLIAGDT----SMLEFLEMSLKNST 305

  Fly   397 PVVVCDGSGRAADLLAFVHKY--------ASDGEE-QPVLESMRDYLIGTIQKTFEVGLDQSEKL 452
            |.:|..|||..|:|::.:.:.        ||:.|: .|::| :|:.|...::|.|....| ::||
Zfish   306 PCLVLAGSGGLANLVSDIVENVQSAAMPGASEEEDASPIME-LREQLAAKVKKYFPAEND-TDKL 368

  Fly   453 YQELLQCTRNKNLITVFRIQEKPEGEAQELDQTILTALFKS--QHLSP-----PEQLSLALTWNR 510
            ..::|...:||::|:::..::  || |::.|..:|..|.::  :|.|.     .::|.|::||||
Zfish   369 VDKVLSIYQNKDIISIYNAEQ--EG-AEDFDIVMLKVLVQASKRHASESTNSYADELRLSVTWNR 430

  Fly   511 VDIARSEIFVYGQEWPNGALDEAMMQALEHDRIDFVKLLLENGVSMKKFLTIPRLEELYNTKHGP 575
            ||||:||:|....:|....|.::|..|||:::..||:||::||:::..:||..|||:|||:....
Zfish   431 VDIAKSELFNGNIDWKYEELVDSMTDALENNKPQFVRLLIDNGLNILSYLTYGRLEKLYNSISDT 495

  Fly   576 --ANTLGYILRDVRPHIPKGYIY--TLHDIGLVINKLMGGAYRSYYTRRKFRPIYAKVMNSYANA 636
              |.||.....|.|.|.....||  :|:::..::..|:|..         ..|.|...::.||.:
Zfish   496 CLAKTLLLHHLDERMHESNEQIYSISLYEVSRLLEDLLGDV---------CHPFYLSELSLYAGS 551

  Fly   637 CRKSSTYQYQRYAGANSLSLVTGLLPFTSEMALFEFPFNELLIWAVLTKRQQMALLMWTHGEEAL 701
            .|:...        ..:..::.|...:..||.  |.|:..|.|||||..|.:||:..|....|::
Zfish   552 TRRKDI--------KKACKVLKGKCKYQDEMC--EHPWLSLFIWAVLQNRSEMAIFCWEMCGESV 606

  Fly   702 AKSLVSCKLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYRQDAEKAQRLLTCELH 766
            ..:|..|||..    |.::.:::|::...::..|.:||...:.:....|:..|..:.:||..:..
Zfish   607 LTALGGCKLLV----ELSKQEIETKVKHSMKELALKFEQMAHDVFGTCYQTKASHSYKLLIRKSK 667

  Fly   767 SWSNQSCLSLAVAANHRALLAHPCSQVILADLWMGGLRTRKNTNFKVILGLAMP--FYIRQLDFK 829
            .|.:.:||.:|:||:.|...:|...|.:|:.:|.|.:. |....:||:|.:..|  .|...::|:
Zfish   668 LWGDATCLEMAIAADARIFFSHDGVQSLLSQIWWGDIE-RDTALWKVLLVMICPPVCYSNFIEFR 731

  Fly   830 SKEELQQMPQTEEEHLENQNLDNDDSDRSQPDAEALLADTYSVRDTKVHENGK------VSLTDS 888
            ..:      |.|||       .:..:..|.|.........||..|.|.|..|:      :.||..
Zfish   732 KAD------QAEEE-------KSATAPPSSPTDFHYGKTVYSFSDIKHHSEGENEDSNHIRLTTK 783

  Fly   889 DTAQFREFFNLSEYNEVKQHQPLRLKKKFYEFYTAPITKFWADSIAYMFFLIMFSFTVLVKME-- 951
            ....|           :|..:...:..::.:|:.||:|.|..:.:.|..||.::::.:||..:  
Zfish   784 GAPAF-----------IKPKKSSFVVSRWKQFWYAPVTSFIGNLLMYFLFLFLYAYVLLVDFKPP 837

  Fly   952 --QMPRWQEWYSIAYITTLGFEKVREIISSEPVAITHKFS----VWAWNMWNPCDGAAIILFVIG 1010
              ..|...|:....::.||..|:::|    ..:|...||.    |:|.:|||..|..||.||:.|
Zfish   838 PPDGPAVSEYVLYFWVFTLVCEEIQE----ASIAGNKKFPQTLIVYAQDMWNKFDVLAICLFIAG 898

  Fly  1011 LAFRFRENTMDIGRVIYCVDSIYWYLRILNILGVNKYLGPLVTMMGKMVKNMIYFVVLLAVVLMS 1075
            |..|....:.::||.|.|||.:.:.||:::|..::|.|||.:.::|||:|:..:|:..|.|.|::
Zfish   899 LCCRMFSWSFNMGRGILCVDYMVFTLRLIHIFAIHKELGPKIIILGKMIKDAFFFLFFLLVWLIA 963

  Fly  1076 FGVSRQAILYPNKQPTWSLIKEVTFQPYFMLYGEVFAGDID--------------------PPCG 1120
            :||:.||:||........:.:.|.::||..::|::...:||                    .||.
Zfish   964 YGVANQALLYQYDASPARVFRRVLYRPYLHIFGDIPVEEIDTGKHWERDCTDNLTLINEGIEPCR 1028

  Fly  1121 EDPSQPGCVTGH-WVTPITMSMYLLIANILLINLLIAVFNNIFNEVNSVSHQVWMFQRFTVVMEY 1184
            :        |.| |:..:.:.::||:.||||||||||.|:..|.:|...|.:.|.|||:.:::||
Zfish  1029 D--------TSHNWLVVVLLVIFLLVTNILLINLLIATFSYTFTKVQEHSDKYWKFQRYNLIVEY 1085

  Fly  1185 QQKPVLPPPFIALCHFYSLLKYCVRKAKGLEVQRDNGLKLFLEKDDLERLYDFEEECVEGFFHEQ 1249
            ..:|.|.||||...|...|:|..:||....:.||   ..|.:...:..:|..:|.      ..::
Zfish  1086 HSRPTLAPPFIIFSHINILIKRKIRKVPSAKTQR---FALKISGREANKLVKWEN------LQKE 1141

  Fly  1250 EIILNQSTDERVKNTTERVETMSQKIEDINQKENIQTATVQNIEFRLRKMEESSEQILSHLAVIH 1314
            ..:..::..:| .:.:||::.|:.|::.       |.|.:::::.|||.:|...|...|.|..|.
Zfish  1142 NYLALENRKQR-GSDSERLKRMAAKVDG-------QVAEIRDVDRRLRALESEMEFCNSSLQWIM 1198

  Fly  1315 RFMS 1318
            ..:|
Zfish  1199 ETLS 1202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001097320.1 Ion_trans 951..1167 CDD:278921 75/244 (31%)
TRPM_tetra 1262..1313 CDD:293127 13/50 (26%)
trpm4b.1XP_009304689.1 Ion_trans 830..1071 CDD:278921 77/252 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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