DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trpm and XB5892783

DIOPT Version :9

Sequence 1:NP_001097320.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2023 Species:Drosophila melanogaster
Sequence 2:XP_002939673.3 Gene:XB5892783 / 100497855 XenbaseID:XB-GENE-5892784 Length:1890 Species:Xenopus tropicalis


Alignment Length:1708 Identity:584/1708 - (34%)
Similarity:889/1708 - (52%) Gaps:290/1708 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 SWIETNFQKRECIKFIPCPKDD-------------TKCCCGQAQITHQTIPGIESGSPG------ 161
            ||||..|.||:|::.||..::.             .:||||:. |.........:|..|      
 Frog     5 SWIEKTFHKRDCVQIIPSSREPHRCLPGCQICQQLVRCCCGRL-IKQHAYYASGAGPSGAAHVQE 68

  Fly   162 -DLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLSFDTRPELLVQLFTKEWNLELPKLLITV 225
             :.|...:||....|||:|||:||.|:|..||:::|||.|::.|.::||..|||:::.|.|:|:|
 Frog    69 SEHWTVDRHTVKSSTDAFGTIDFQCGSHGYKAKFIRLSDDSKVEDILQLMIKEWHMKRPNLVISV 133

  Fly   226 QGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVSIGI 290
            .||...|:|..:.|:...||.:|||.:|||||||||||.||...:|||:.....:.|..:..||:
 Frog   134 HGGMQKFELHPRFKEAFGKGFVKAAVSTGAWIFTGGTNNGVAAHIGDAIKEYATRLTHNISIIGV 198

  Fly   291 APWGIVERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRRKLEKF 355
            |||||:|...:|:|:|...|..::.||.|||.||||.|::|||||:||..:.|.|:.|||:||..
 Frog   199 APWGIIEGRQDLIGNNVMAPYQTLLSPLSKLHVLNNLHSHFLLVDDGTAGRTGGEINLRRELENK 263

  Fly   356 ISNLKLHPFTHSSTPVVCLVIEGGTNTIRAVLEYVTDSPPVPVVVCDGSGRAADLLAFVHKYASD 420
            .|..:.:..|....|::.|::|||..||..||||:..|||||||||:|:||||||||:|||:...
 Frog   264 TSLQQFNAKTGRHVPMMALILEGGPKTILTVLEYLQQSPPVPVVVCEGTGRAADLLAYVHKHTES 328

  Fly   421 GEEQPVLESMRDYLIGTIQKTFEVGLDQSEKLYQELLQCTRNKNLITVFRIQEKPEGEAQELDQT 485
            ....|  :.|...:|..|:|||.:..:::..|:|.|:.|.:.|.||||..|  .|:.. ||:|..
 Frog   329 SGLLP--DGMESNVISIIKKTFTLNKNEALLLFQTLMCCMQMKELITVLHI--GPDIH-QEIDVD 388

  Fly   486 ILTALFKSQHLSPPEQLSLALTWNRVDIARSEIFVYGQEWPNGALDEAMMQALEHDRIDFVKLLL 550
            :|.||.|..::||.::|.|||.|:|||||::.|||.||:|....|::.||.||..||::|||||:
 Frog   389 LLKALLKGNNISPIDRLHLALAWDRVDIAKNHIFVRGQQWLTEPLEQVMMDALIMDRVEFVKLLI 453

  Fly   551 ENGVSMKKFLTIPRLEELYNTKHGP-ANTLGYILRDVRP-HIPKGYIYTLHDIGLVINKLMGGAY 613
            ||||||:||||||||:||||.|... ::||..::.:::. ::|..|..|:.|:||||..||||.:
 Frog   454 ENGVSMQKFLTIPRLDELYNVKPDTNSDTLLQLILEIKKGNVPGKYKITMMDVGLVIEYLMGGVF 518

  Fly   614 RSYYTRRKFRPIYAKVMNSYANA--------------CRKSSTYQYQRYA--------------- 649
            ||.||::.|:.:|..:..|...:              ..|..|....|:.               
 Frog   519 RSRYTKKNFKAMYKALSQSSIRSPAGGTSKHPQNEKNLGKEVTKDKTRHTHFIQTAQPYKAKTSG 583

  Fly   650 --GANSLSLVTGLLPFTSEMAL-FEFPFNELLIWAVLTKRQQMALLMWTHGEEALAKSLVSCKLY 711
              |.:..|.....|...:::.. |.:|||:||:||||||||:|||..|.||||::||:||:.|||
 Frog   584 THGDSQKSSRNDALEADNQITRPFPYPFNDLLVWAVLTKRQKMALFFWQHGEESMAKALVATKLY 648

  Fly   712 KAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYRQDAEKAQRLLTCELHSWSNQSCLSL 776
            :.|..||.:.|:..:..|:|:.|:|||.....:|||.|::|:...|.:|||.||.:||..:||.|
 Frog   649 RGMYQEAQQSDIIDDSSEKLKKYSKEFGELAVELLDQSFKQNDLMAMKLLTYELKNWSKSTCLKL 713

  Fly   777 AVAANHRALLAHPCSQVILADLWMGGLRTRKNTNFKVILGLAMPFYIRQLDFKSKEELQQMPQTE 841
            ||::..|..::|.|:|::|.|:|||.|..|||..:|||.|:..|..|...|:|:..::..:||::
 Frog   714 AVSSRLRTFVSHTCTQMLLNDMWMGRLNMRKNAWYKVISGIFFPPIIPLFDYKTMAQMSHIPQSQ 778

  Fly   842 EEHLENQNLDNDDSDRSQPDAEALLADTYSVR---DTKVHENGKVSLTDSDTAQFREFFNLSEYN 903
            :::  ..||  ||.:......|.:..:.:..:   ....|..|.                   .|
 Frog   779 DDY--KMNL--DDKEEITCSVEGIALEAFKEKCPNGENEHSTGM-------------------KN 820

  Fly   904 EVKQHQPLR--LKKKFYEFYTAPITKFWADSIAYMFFLIMFSFTVLVKMEQMPRWQEWYSIAYIT 966
            |.|   |.|  :.::||.||.|||.|||..::.||.||::::|.||||||.:|..|||..|..|.
 Frog   821 EGK---PKRVPIARRFYAFYHAPIVKFWLSTLVYMAFLMLYAFVVLVKMESLPSVQEWIVILSIL 882

  Fly   967 TLGFEKVREIISSEPVAITHKFSVWAWNMWNPCDGAAIILFVIGLAFRF--RENTMD-------- 1021
            |.|.||:|||..||...:|.|..||..:..|..|..|||.|::|...||  |:..:|        
 Frog   883 TTGVEKIREIFMSEAGKLTQKLRVWFSSYLNINDAIAIITFLVGFGLRFGGRDFMLDSDYHEDDY 947

  Fly  1022 ---IGRVIYCVDSIYWYLRILNILGVNKYLGPLVTMMGKMVKNMIYFVVLLAVVLMSFGVSRQAI 1083
               .||:|||:::|:|::|:|:||.||:..||.|.|:||||.:|.|.||::.:||:::|:.|:||
 Frog   948 IFIAGRLIYCLNTIFWFIRLLDILSVNQEAGPYVLMVGKMVMSMFYVVVIMVIVLITYGIPRKAI 1012

  Fly  1084 LYPNKQPTWSLIKEVTFQPYFMLYGEVFAGDIDPPCGEDPSQPG-CVTGHWVTPITMSMYLLIAN 1147
            |||::.|:|:|.|:|.|.||||:||||||.:|| .||.|.:.|. |.||.|:||...:.|||:..
 Frog  1013 LYPHEDPSWTLAKDVLFHPYFMIYGEVFAYEID-VCGNDSAVPHLCGTGTWITPFLEATYLLVNY 1076

  Fly  1148 ILLINLLIAVFNNIFNEVNSVSHQVWMFQRFTVVMEYQQKPVLPPPFIALCHFYSLLKYCV--RK 1210
            ::::||:|||||:::.:..|:|:.:|..||:..:|.:..|||||||.|.|.:..||.. ||  ||
 Frog  1077 VIMVNLIIAVFNHVYLQYKSMSNIIWKCQRYKFIMAFHSKPVLPPPLIILSYVTSLFS-CVFLRK 1140

  Fly  1211 AKGLEVQRDNGLKLFLEKDDLERLYDFEEECVEGFFHEQEIILNQSTDERVKNTTERVETMSQKI 1275
            .|    .:.:|.||:|.:::.::|::|||.||..:...:|.......|||:|.|:|..:.:|:::
 Frog  1141 QK----NKTHGPKLYLTEEEQKKLHEFEEHCVGIYLIYKEDKNKNKPDERIKVTSETTDHISKEM 1201

  Fly  1276 EDINQKENIQTATVQNIEFRLRKMEESSEQILSHLAVIHRFMSTHTAGADDLRG------STINI 1334
            :::.::       |..|:..|..:::                  |.....||.|      .|:..
 Frog  1202 DNVGEQ-------VMFIKRSLLSLDK------------------HIGHLQDLSGLTFDTLKTLTA 1241

  Fly  1335 PGEMQRMRTIS-----ISDTEGGSGPGGNGGGGGGGGAIVPLGLGA------------------G 1376
            ...::..|::|     :|.:...|..                ||.|                  |
 Frog  1242 QKALETSRSLSAMSCDLSLSRYASSD----------------GLSAIWKRSNTDQVWACPYTQHG 1290

  Fly  1377 L--NLNSLQVTTRRRFNRSLTEVRPDAYIFDEGTHFEVVPLPE-EPDEVVKSREALNEQVVRKAS 1438
            |  |::.....:.|:.|      .|||...:.........:|: :.:.:.:.::..|.|.:...:
 Frog  1291 LERNMHPRASKSHRKTN------IPDADFVNSSMFQRADSVPDSQKENLFEEKDNFNNQKLFNQT 1349

  Fly  1439 MQSEADSD--------------IYIPVSQRPSTCE-TVKRTPYVTVR--QD--TGASTESKDTL- 1483
            :|:.|.|:              |..|.|:...:|: |..:..||...  .|  .|.:...|:.: 
 Frog  1350 LQAHAKSEIRSQVCDMKSGLDQIISPCSEDNPSCKCTCSKEGYVNCGFIDDIANGHNNNEKNIMD 1414

  Fly  1484 -----TPMGN-----------NDDDQTLVGGD---------------------------NSDDAT 1505
                 ||.|:           ||.|.|....|                           ||.:|.
 Frog  1415 CESYSTPRGDLWHGVKSLPHMNDQDITQKKKDRFTGFFQKLWHGSRHKHSLEKQMSVDTNSSEAE 1479

  Fly  1506 PDINFEAARHRALRQRTVSLCRRNSETYSLTGADINRSHISLNQLASLSRRQMSLTQSEPD---- 1566
            .:| |.|..|....:...:| ||......||..:.:.:..|.||:      ||:...:.|:    
 Frog  1480 ANI-FNACLHNLYNEDETNL-RRTQSCTELTSFNGSPAPDSPNQI------QMNSRATSPEDYYQ 1536

  Fly  1567 SDKDAPIAQGSAHPGKSVLHAK-PSR-----------NILLKLHSEYTSITDELESVCHMIAS-P 1618
            :|.:|.:.:.|.:...|:.|.| ||:           |......|.||::  |..::..:..| |
 Frog  1537 TDSEAALLKESLYSRYSLNHNKSPSQERIWNGFGSQFNTSKDTTSYYTAV--ERNNLYRLSQSIP 1599

  Fly  1619 TVSLPSNKASLDRPKTEM 1636
            ...||        ||.|:
 Frog  1600 FTPLP--------PKGEL 1609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001097320.1 Ion_trans 951..1167 CDD:278921 103/229 (45%)
TRPM_tetra 1262..1313 CDD:293127 7/50 (14%)
XB5892783XP_002939673.3 LSDAT_euk 100..365 CDD:407971 122/266 (46%)
trp <961..1234 CDD:273311 114/303 (38%)
TRPM_tetra 1184..1237 CDD:406826 14/77 (18%)
Alpha_kinase 1608..1845 CDD:355793 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48134
Panther 1 1.100 - - O PTHR13800
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X538
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

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