DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trpm and trpm7

DIOPT Version :9

Sequence 1:NP_001097320.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2023 Species:Drosophila melanogaster
Sequence 2:XP_002939674.2 Gene:trpm7 / 100329113 XenbaseID:XB-GENE-486884 Length:1875 Species:Xenopus tropicalis


Alignment Length:1695 Identity:629/1695 - (37%)
Similarity:927/1695 - (54%) Gaps:198/1695 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 RSWIETNFQKRECIKFIPCPKDD-------------TKCCCGQAQITHQTIPGIESGSPGDL--- 163
            :||||.:|.||||...||..||.             .:||||:....|.......:....|:   
 Frog     5 KSWIENSFTKRECTYIIPSSKDPHRCLPGCQICQQLVRCCCGRLVRQHACFTASVATKYSDVKLG 69

  Fly   164 ---------WLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLSFDTRPELLVQLFTKEWNLELP 219
                     |...|||...||||||.|.||||:|..:|:|||||:|::||.::||..|||.:|||
 Frog    70 EQFNEELEEWSVEKHTEESPTDAYGVINFQGGSHSYRAKYVRLSYDSKPEAILQLMLKEWQMELP 134

  Fly   220 KLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIFTGGTNTGVTKQVGDALLLEGQQRTGR 284
            ||:|:|.||...|:|..::|:.|.|||:|||.||||||.|||.|.||.|.|||||.....:.:.:
 Frog   135 KLVISVHGGMQKFELHPRIKQLIGKGLIKAAVTTGAWILTGGVNAGVAKHVGDALKEHASRSSRK 199

  Fly   285 VVSIGIAPWGIVERNHELLGHNREVPCHSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILR 349
            :.:|||||||::|..::|:|.:...|..::.:|.|||.||||.|::|:|||:||..|||||:.||
 Frog   200 ICTIGIAPWGVIENRNDLIGRDVIAPYQTLLNPLSKLNVLNNLHSHFILVDDGTVGKYGAEVNLR 264

  Fly   350 RKLEKFISNLKLHPFTHSSTPVVCLVIEGGTNTIRAVLEYVTDSPPVPVVVCDGSGRAADLLAFV 414
            |:|||.|:..::|.......|||.|:.|||.|.|..||||:.:|||||||||:|:|||||:||:|
 Frog   265 RELEKTINLQRIHARIGQGVPVVALIFEGGPNVILTVLEYLQESPPVPVVVCEGTGRAADILAYV 329

  Fly   415 HKYASDGEEQPVLESMRDYLIGTIQKTFEVGLDQSEKLYQELLQCTRNKNLITVFRIQEKPEGEA 479
            ||...:|...|  |.....:|.||:|||.....::..|:|..::|.::|.|||||.|   ...|.
 Frog   330 HKQTEEGGTLP--EGADLEIISTIKKTFNFSQSEAIHLFQTTMECMKSKELITVFHI---GSDEH 389

  Fly   480 QELDQTILTALFKSQHLSPPEQLSLALTWNRVDIARSEIFVYGQEWPNGALDEAMMQALEHDRID 544
            |::|..|||||.|..:.|..:||.|.|.|:|||||::.:|||||:|..|:|::||:.||..||:.
 Frog   390 QDIDVAILTALLKGTNASALDQLVLTLAWDRVDIAKNHVFVYGQQWLVGSLEQAMLDALVMDRVA 454

  Fly   545 FVKLLLENGVSMKKFLTIPRLEELYNTKHGPAN-TLGYILRDVRP-HIPKGYIYTLHDIGLVINK 607
            |||||:||||||.|||||||||||||||.||.| ||.:::|||:. ::|.||..||.|:||||..
 Frog   455 FVKLLIENGVSMHKFLTIPRLEELYNTKQGPTNPTLFHLVRDVKQGNLPPGYKITLIDVGLVIEF 519

  Fly   608 LMGGAYRSYYTRRKFRPIYAKVM---------------------NSYANACRKSSTYQY------ 645
            ||||.||..|||::||.||..:.                     .|:.|...|....::      
 Frog   520 LMGGTYRCTYTRKRFRIIYNNIQGGNRRSGRNTSSNTPQMRKSHESFGNRADKKEKMRHNHFIKT 584

  Fly   646 -QRYAGANSLSLVTGLLPFTS---------EMALFEFPFNELLIWAVLTKRQQMALLMWTHGEEA 700
             |.|.....:|...|....|.         ||..|::||||||:|:||.|||:|||..|.||||:
 Frog   585 AQPYKPKQDVSADDGKKKKTKEEIVDIDDPEMKRFQYPFNELLVWSVLMKRQKMALFFWQHGEES 649

  Fly   701 LAKSLVSCKLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYRQDAEKAQRLLTCEL 765
            :||:||:|||.:.||:||.:.|:..||.||.:.::.||......|||.::|||...|.:|||.||
 Frog   650 MAKALVACKLCRTMAYEAKQSDVVDEIAEEFKEHSSEFGQLAVDLLDQAFRQDETMAMKLLTYEL 714

  Fly   766 HSWSNQSCLSLAVAANHRALLAHPCSQVILADLWMGGLRTRKNTNFKVILGLAMPFYIRQLDFKS 830
            .:|||.:||.|||::..|..:||.|:|::|:|:|||.|..|||:.:||||.:.:|..|..|::|:
 Frog   715 KNWSNSTCLKLAVSSRLRPFVAHTCTQMLLSDMWMGRLNMRKNSWYKVILSILVPPTILMLEYKT 779

  Fly   831 KEELQQMPQTEEEHLENQNLDNDDSDRSQPDAEALLADTYSVRDTKVHENGKVSLTDSDTAQFRE 895
            |.|:..:||:::.    ..:..|||:.:                   .:|...::..:...:.|.
 Frog   780 KAEMSHIPQSQDA----LQMTMDDSENN-------------------FQNLPENIAMNVFREVRP 821

  Fly   896 FFNLSEYNEVK-QHQP--LRLKKKFYEFYTAPITKFWADSIAYMFFLIMFSFTVLVKMEQMPRWQ 957
            |..:...:|:: |.:|  |.:.:|||.||.|||.|||.:::.|:.||::|::.||||||.:|..|
 Frog   822 FDTMEVKHEIETQAKPRKLPITQKFYAFYHAPIVKFWFNTLFYLGFLMLFTYVVLVKMESLPSVQ 886

  Fly   958 EWYSIAYITTLGFEKVREIISSEPVAITHKFSVWAWNMWNPCDGAAIILFVIGLAFR-------- 1014
            ||..|:||.|...||:|||..||...|..|..||..:.:|..|..|||.|.||...|        
 Frog   887 EWIVISYIFTSAVEKIREIFMSEAGKINQKVKVWFGDYFNITDTIAIITFFIGCGLRLGAYRDVP 951

  Fly  1015 --------FRENTMDIGRVIYCVDSIYWYLRILNILGVNKYLGPLVTMMGKMVKNMIYFVVLLAV 1071
                    :.|.....||:.||::.|:||:|:|:.|.||:..||.|.|:||||.||.|.||::||
 Frog   952 EDQLKDDEYNETISLAGRLTYCLNIIFWYVRLLDFLAVNQQAGPYVMMIGKMVANMFYIVVIMAV 1016

  Fly  1072 VLMSFGVSRQAILYPNKQPTWSLIKEVTFQPYFMLYGEVFAGDIDPPCGEDPSQPG-CVTGHWVT 1135
            ||:||||.|||||||:::|:|.|.:::.||||:|::|||:|.:|| .|..:...|. |..|.|:|
 Frog  1017 VLLSFGVPRQAILYPHQEPSWRLARDIVFQPYWMIFGEVYAYEID-VCANNSEVPDLCDVGTWLT 1080

  Fly  1136 PITMSMYLLIANILLINLLIAVFNNIFNEVNSVSHQVWMFQRFTVVMEYQQKPVLPPPFIALCHF 1200
            |...::||.:..|:::|||||.|||::.||.::||.||.:||:..:|.|.:|||||||.|.|.|.
 Frog  1081 PFLQAVYLFVQYIIMVNLLIAFFNNVYFEVKAISHIVWKYQRYHFIMAYHEKPVLPPPLIILSHL 1145

  Fly  1201 YSLLKY-CVRKAKGLEVQRDNGLKLFLEKDDLERLYDFEEECVEGFFHEQEIILNQSTDERVKNT 1264
            .||..: |.|:.|.   :..:|.||||.::|.::|:||||:|||.:|:|::...:..::||::.|
 Frog  1146 ASLFGFVCKRRKKD---KTSHGPKLFLTEEDQKKLHDFEEQCVETYFNEKDDKFHLGSEERIRVT 1207

  Fly  1265 TERVETMSQKIEDINQKENIQTATVQNIEFRLRKMEESS-----------EQILSHLAVIHRFMS 1318
            :||||.|..:|:::..:.|....::.:::.::..:::.|           .|..|..:.:|..::
 Frog  1208 SERVEQMCIQIKEVGDRVNYIKRSLHSLDTQIGHLQDLSALTVDTLKTLTAQKASEASKVHNEIT 1272

  Fly  1319 THTAGADDLRGSTINIPGEMQRMR-TISISDTEGGSGPGGNGGGGGGGGAIVPLGLGAGLNLNSL 1382
            ...:.:..| |.|:...|.::.:| ..|:.:..|.|.|.||  .......|..:.|....|..|.
 Frog  1273 RELSISKHL-GQTVVDDGPLRSLRKKHSVGNFFGSSFPQGN--QESNSNLIFNISLRNERNSQSR 1334

  Fly  1383 QVTTR-----RRFNRSLTEVRPDAYIFDEGTHFEVVPLPEEPDEVVKSREALNEQVVRKASMQSE 1442
            :....     ||.|.::.|..|.....   .|.:  ..|.:..|..:..|:|.:..:......||
 Frog  1335 KTGDEFCFPYRRENLNIPEAGPSGSAL---LHSK--DCPTDAMENTEGTESLTDNQIVDNVASSE 1394

  Fly  1443 ADS-----DIYIPVSQRPSTCETVKRTPYVT--VRQDTGASTESKDTLTPMGNNDD----DQTLV 1496
            .:|     ..::....:|::...::..|.:.  :.|......||.:....:|:.|:    .....
 Frog  1395 PNSVSGMATFFVSTPTQPNSASQLELEPKMEKYINQRAAREAESIEFGAFVGHRDNVILHKYKEP 1459

  Fly  1497 GGDNSDDATPDINFEAARHRALRQRTVSLCRRNSETYSLTGADINRSHISLNQLASLSRRQMSLT 1561
            .|.:.::|.......|....:|:|  |..|....:.     :.|:||. .||:|.|.|||.....
 Frog  1460 EGKSKEEAKATDVVVAPALPSLKQ--VRSCAGFMDL-----STISRSS-QLNKLHSSSRRASLTE 1516

  Fly  1562 QSEPDSDKDAPIAQGSAHPGKSVLHAKP--------------------------SRNILLKLHSE 1600
            .|..:..|:|.:.........|...|||                          .||.|::|...
 Frog  1517 DSNLEETKEAFLTNWLQAHSSSTSKAKPPEDDAFNAIGSPFKPIVDINYCYSAVERNNLMRLAQS 1581

  Fly  1601 --YTSI--TDELESVCHMIASPTVSLPSNKASLDR----PKTE-MSRAEAAALLEKKHLKEC--E 1654
              :|.:  ..||.:|..:..|....|.::.:|..:    .|.| :|:.|....|.:.....|  .
 Frog  1582 IPFTPVPPKGELVTVYRLEESSPNMLNNSMSSWSQRGLCAKIEFLSKEEMGGGLRRAVKVVCTWS 1646

  Fly  1655 ENDYM 1659
            |||.:
 Frog  1647 ENDIL 1651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001097320.1 Ion_trans 951..1167 CDD:278921 104/232 (45%)
TRPM_tetra 1262..1313 CDD:293127 11/61 (18%)
trpm7XP_002939674.2 Ion_trans 868..1112 CDD:278921 111/244 (45%)
TRPM_tetra 1205..1256 CDD:293127 9/50 (18%)
Alpha_kinase 1610..1828 CDD:214828 10/42 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 408 1.000 Domainoid score I685
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1172 1.000 Inparanoid score I201
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48134
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X538
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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