DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and ITGA8

DIOPT Version :9

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_003629.2 Gene:ITGA8 / 8516 HGNCID:6144 Length:1063 Species:Homo sapiens


Alignment Length:1138 Identity:298/1138 - (26%)
Similarity:474/1138 - (41%) Gaps:243/1138 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AYNISPYPNSVLNFPELEGNRRSSYFGFSLVI-----REKSIMVAAPRANSSLEAQRNISEPGVI 77
            |:|:.....:|.:.|      :.||||:::..     |..|::|.||:||:|   |.:|.|.|.:
Human    38 AFNLDVEKLTVYSGP------KGSYFGYAVDFHIPDARTASVLVGAPKANTS---QPDIVEGGAV 93

  Fly    78 FRCYF--ESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDKFLVCAPRFY 140
            :.|.:  |....|.....||..|.|...|......:.|..:|.|..:..   ...|.:.|||.: 
Human    94 YYCPWPAEGSAQCRQIPFDTTNNRKIRVNGTKEPIEFKSNQWFGATVKA---HKGKVVACAPLY- 154

  Fly   141 SINNENDYNNGMCYW--LSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPYYSM-------- 195
                         :|  |..||         ||.|:     ....:|..|...|...        
Human   155 -------------HWRTLKPTP---------EKDPV-----GTCYVAIQNFSAYAEFSPCRNSNA 192

  Fly   196 ---GELGLSAHVSDD---NSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNEC 254
               |:....|..|.|   |..|::|.||...|:|.|........|...|.:.........|..|.
Human   193 DPEGQGYCQAGFSLDFYKNGDLIVGGPGSFYWQGQVITASVADIIANYSFKDILRKLAGEKQTEV 257

  Fly   255 NPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIYKYHEFR 319
            .|     ...:.||.||:|::|.|...:...:  ||..|||...||  |:..|....:.....|.
Human   258 AP-----ASYDDSYLGYSVAAGEFTGDSQQEL--VAGIPRGAQNFG--YVSIINSTDMTFIQNFT 313

  Fly   320 GNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALR----NSYDDGAIYVFINKGSFTFEERIIRS 380
            |.....||||:|:..|:|.||..||::.|||:..|    |..:.|.||:::...|..|.:..|.:
Human   314 GEQMASYFGYTVVVSDVNSDGLDDVLVGAPLFMEREFESNPREVGQIYLYLQVSSLLFRDPQILT 378

  Fly   381 PAGSGGRFGTTLSRIGDINKDGYNDVAVGAPFAG---NGSVFIYLGSENGLRDPPSQCLD---AP 439
            ...:.||||:.::.:||:|:|||||:|:|.||||   .|.|.||.|:::||...|||.|.   |.
Human   379 GTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQRGKVLIYNGNKDGLNTKPSQVLQGVWAS 443

  Fly   440 SQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHA--IIKPKLQNVN 502
            ...||.     ||..|...||||.|.:.|..:||.....|.:|||.|||.:.|  ::.|.:.|:.
Human   444 HAVPSG-----FGFTLRGDSDIDKNDYPDLIVGAFGTGKVAVYRARPVVTVDAQLLLHPMIINLE 503

  Fly   503 PEEERV----------NITVCYRLSSKSDSKAKALMEQELVIRID-IDTKSKIKLAVFDEEHGSQ 556
            .:..:|          ::.||..::.:|.:....||.:   :::| :..|..||..:|.:.|.:.
Human   504 NKTCQVPDSMTSAACFSLRVCASVTGQSIANTIVLMAE---VQLDSLKQKGAIKRTLFLDNHQAH 565

  Fly   557 MSF----KAKAFHEEICSEFQI----EMDKRAKFTPIALEMQYELSKKIPNSGDFCEDCAVVDPA 613
            ..|    |.:..|:  |.:|.:    |.:.|.|.:||.:.:.|.|.:.....|  .|...:::..
Human   566 RVFPLVIKRQKSHQ--CQDFIVYLRDETEFRDKLSPINISLNYSLDESTFKEG--LEVKPILNYY 626

  Fly   614 EPKFVTEYITFNTGCATD-VCVADLKISCINASSTLVLGTTAVLRLTYNITNNGEFAYHPKFSV- 676
            ....|:|.......|..| :||.|||:|.......:::|....|.|..|..|.||.||..:..| 
Human   627 RENIVSEQAHILVDCGEDNLCVPDLKLSARPDKHQVIIGDENHLMLIINARNEGEGAYEAELFVM 691

  Fly   677 -----------TNSAGLSLAQVPGNCKVN----EAVMVCDLNHGQRMAKGDTDSLTISFDVRQLR 726
                       .|:.|..    |.:|:..    ..::||||  |..|..|...||.:.|.|.:|.
Human   692 IPEEADYVGIERNNKGFR----PLSCEYKMENVTRMVVCDL--GNPMVSGTNYSLGLRFAVPRLE 750

  Fly   727 GRSLEIQAEV-LSARDESNPENNKLTNVLSLREKADIYVSGVQTNDHVVL-------KESPYTAE 783
            ..::.|..:: :.:.::.||::|.::..:::...|.:.:.||.....:||       :|.|:..|
Human   751 KTNMSINFDLQIRSSNKDNPDSNFVSLQINITAVAQVEIRGVSHPPQIVLPIHNWEPEEEPHKEE 815

  Fly   784 -----VVNYYEIKSHGPSTLENLTVSLYIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINF- 842
                 |.:.||:.:.||||:.:..:.:..|.:.:......:.||.|..| :|.:....|.|.:. 
Human   816 EVGPLVEHIYELHNIGPSTISDTILEVGWPFSARDEFLLYIFHIQTLGP-LQCQPNPNINPQDIK 879

  Fly   843 -------IDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVE---QNPSISLLNEDLPVNN 897
                   ..:.:|...|..|.|     |......|        :||   |:|:            
Human   880 PAASPEDTPELSAFLRNSTIPH-----LVRKRDVH--------VVEFHRQSPA------------ 919

  Fly   898 TLVLNCQDTNVTLCVPVEI---RLENGLQLKPEELMNMTVSFTVNLKDADDIWEYFVIQTDLKVH 959
             .:|||  ||:. |:.:..   |||.|     |..:         ||....:|.:..:|      
Human   920 -KILNC--TNIE-CLQISCAVGRLEGG-----ESAV---------LKVRSRLWAHTFLQ------ 960

  Fly   960 KIGDP----TLSSFTIEK--------KI-ESNVICKHA----------EIAIWKIIVSVIVGILV 1001
            :..||    :|.||.::|        |: |.:::.|.:          .|.:|.||:::::|:||
Human   961 RKNDPYALASLVSFEVKKMPYTDQPAKLPEGSIVIKTSVIWATPNVSFSIPLWVIILAILLGLLV 1025

  Fly  1002 FSAATYALYKRGFFKRA-----IKDDLKQLIRD 1029
            .:..|.||:|.|||.||     ...|.:||..|
Human  1026 LAILTLALWKCGFFDRARPPQEDMTDREQLTND 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 VCBS 335..408 CDD:290251 29/76 (38%)
Int_alpha 384..434 CDD:214549 26/52 (50%)
Int_alpha 447..>492 CDD:214549 18/44 (41%)
Integrin_alpha2 484..808 CDD:285619 88/374 (24%)
ITGA8NP_003629.2 Int_alpha 54..112 CDD:214549 19/60 (32%)
Int_alpha 263..311 CDD:214549 16/51 (31%)
Int_alpha 317..>365 CDD:214549 19/47 (40%)
Int_alpha 383..437 CDD:214549 28/53 (53%)
Int_alpha 448..492 CDD:214549 19/48 (40%)
Integrin_alpha2 483..934 CDD:285619 112/493 (23%)
Integrin_alpha 1035..1049 CDD:278771 6/13 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142008
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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