DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and ITGA10

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:XP_016858111.1 Gene:ITGA10 / 8515 HGNCID:6135 Length:1181 Species:Homo sapiens


Alignment Length:926 Identity:208/926 - (22%)
Similarity:357/926 - (38%) Gaps:252/926 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 MGELGLSAHVSDDNSKLLMGAPGIDQWKGSV------H--------LKQEVPSIKTSSGRQRRGM 245
            |.::|.|.|...|.  :|.|..|...|.|||      |        |:.|.|             
Human   386 MSQIGFSTHRLKDG--ILFGMVGAYDWGGSVLWLEGGHRLFPPRMALEDEFP------------- 435

  Fly   246 NTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYED 310
                      |..:|..    :|.||:|||........   |:::.|||..:: |:...|.:.:|
Human   436 ----------PALQNHA----AYLGYSVSSMLLRGGRR---LFLSGAPRFRHR-GKVIAFQLKKD 482

  Fly   311 SIYKY-HEFRGNHFGEYFGYSVLAEDLNGDGKTDV-IISAPLYALRNSYDDGAIYVFI--NKGSF 371
            ...:. ...:|...|.|||..:...|.:.||.||| :::||::....:.:.|.:||::  .:...
Human   483 GAVRVAQSLQGEQIGSYFGSELCPLDTDRDGTTDVLLVAAPMFLGPQNKETGRVYVYLVGQQSLL 547

  Fly   372 TFEERIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAPF--AGNGSVFIYLGSENGLRDPPSQ 434
            |.:..:...|. ...|||..:..:.|:|:||:.|||||||.  ...|::::|.|:::|:|..|:|
Human   548 TLQGTLQPEPP-QDARFGFAMGALPDLNQDGFADVAVGAPLEDGHQGALYLYHGTQSGVRPHPAQ 611

  Fly   435 CLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHAIIKPKLQ 499
            .:.|.|...:.  || ||..:....|:||:...|.|:||..  |..|..:.|:|.    :.|.|:
Human   612 RIAAASMPHAL--SY-FGRSVDGRLDLDGDDLVDVAVGAQG--AAILLSSRPIVH----LTPSLE 667

  Fly   500 NVNPE-------------EERVNIT--VCYRLSSKSDSKAKALMEQELVIRI--DIDTKSKIKLA 547
             |.|:             :|.|.:|  :|::::|::..:    .:.:..:|.  .:|..:....|
Human   668 -VTPQAISVVQRDCRRRGQEAVCLTAALCFQVTSRTPGR----WDHQFYMRFTASLDEWTAGARA 727

  Fly   548 VFDEEHGSQMSFKAKAFHEEI----CSEFQIE-MDKRAKFTPIALEMQYEL---SKKIPNSGDFC 604
            .||   ||......:.....:    |.:.... :|......|:||.:.:.|   :|..|      
Human   728 AFD---GSGQRLSPRRLRLSVGNVTCEQLHFHVLDTSDYLRPVALTVTFALDNTTKPGP------ 783

  Fly   605 EDCAVVDPAEPKFVTEYITFNTGCATD-VCVADLKISCIN-------ASSTLVLGTTAVLRLTYN 661
                |::...|..:.:.:.|:..|..| .||.||.:. :|       .:..:|.|....:.::..
Human   784 ----VLNEGSPTSIQKLVPFSKDCGPDNECVTDLVLQ-VNMDIRGSRKAPFVVRGGRRKVLVSTT 843

  Fly   662 ITNNGEFAYHPKFSVTNSAGLSLAQ--------VPGNCKVNEA-VMVCDLNHG--QRMAKGDTDS 715
            :.|..|.||:...|:..|..|.||.        :...|....| ..:|.:.|.  |..|| .|..
Human   844 LENRKENAYNTSLSLIFSRNLHLASLTPQRESPIKVECAAPSAHARLCSVGHPVFQTGAK-VTFL 907

  Fly   716 LTISFDVRQLRGRSLEIQAEV-LSARDESNPENNKLTNVLSLREKADIYVSGVQTNDHVVLKESP 779
            |...|..     .||..|..| |:|..:|...|..|                 |.|         
Human   908 LEFEFSC-----SSLLSQVFVKLTASSDSLERNGTL-----------------QDN--------- 941

  Fly   780 YTAEVVNYYEIKSH----GPSTLENLTVSLY--IPVA----YKTPDSTNVKHIVTSSPKIQSKYA 834
             ||:...|.:.:.|    ..|||....|..|  :||.    :||            :.::|:...
Human   942 -TAQTSAYIQYEPHLLFSSESTLHRYEVHPYGTLPVGPGPEFKT------------TLRVQNLGC 993

  Fly   835 HKIMPINFIDQNNALANNFAIDHDQSTLLFSA-TPQHENVGN----LSGIVEQNPSISLLN---- 890
            :.:                      |.|:.|| .|...:.||    ||.::..|.|..:.|    
Human   994 YVV----------------------SGLIISALLPAVAHGGNYFLSLSQVITNNASCIVQNLTEP 1036

  Fly   891 -------EDLPVNNTL--------VLNC------QDTNVTLCVPVEIRLENGLQLKPEELMNMTV 934
                   |:|...|.|        |:.|      :.|.|::.:   :||.:....:..:..::||
Human  1037 PGPPVHPEELQHTNRLNGSNTQCQVVRCHLGQLAKGTEVSVGL---LRLVHNEFFRRAKFKSLTV 1098

  Fly   935 SFTVNLKDADDIWEYFVIQTDLKVHKIGDPTLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGI 999
            ..|..|...:.           .|.::.:.:..|.::.:.:::..|.    |::|.:|.||:.|:
Human  1099 VSTFELGTEEG-----------SVLQLTEASRWSESLLEVVQTRPIL----ISLWILIGSVLGGL 1148

  Fly  1000 LVFSAATYALYKRGFF 1015
            |:.:...:.|:|.|||
Human  1149 LLLALLVFCLWKLGFF 1164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 22/75 (29%)
Int_alpha 384..434 CDD:214549 20/51 (39%)
Int_alpha 447..>492 CDD:214549 15/44 (34%)
Integrin_alpha2 486..808 CDD:462478 77/372 (21%)
ITGA10XP_016858111.1 vWA_integrins_alpha_subunit 180..360 CDD:238746
Int_alpha 496..546 CDD:214549 15/49 (31%)
Int_alpha 559..613 CDD:214549 21/53 (40%)
Integrin_alpha2 657..1064 CDD:462478 99/496 (20%)
Blue background indicates that the domain is not in the aligned region.

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