DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and zmp:0000001082

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001373553.1 Gene:zmp:0000001082 / 557935 ZFINID:ZDB-GENE-140106-42 Length:1151 Species:Danio rerio


Alignment Length:1290 Identity:274/1290 - (21%)
Similarity:458/1290 - (35%) Gaps:408/1290 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIREKS--IMVAAPRANSSL 65
            |:..:::.|..||  |:|:.      ...|.:.....:.:||:|:...|.|  |:|.||.|.:| 
Zfish     4 CVFTLLMCACLSE--AFNMD------TEHPLVYNGSAADFFGYSVHQSESSTQIIVGAPLARNS- 59

  Fly    66 EAQRNISEPGVIFRC-------------------YFESG---------NNCSPY-NIDTKGN--- 98
                    .|.|:.|                   :|...         .:|||| ..|..||   
Zfish    60 --------TGEIYTCASDLRSCKALRRPDSERVRFFSMSVSVSPDAPLTSCSPYLPHDCDGNSYL 116

  Fly    99 ----------YKGMPN-------------------DGLLTAK------NKDFRWLGGAMDGGTRD 128
                      .:.:.|                   ||..:.|      ||||  :...|...:..
Zfish   117 NGICYQFNSGLQAVSNFTAAYQECTKREVNLVFLFDGSRSMKPEEFDLNKDF--ITDIMKKLSNS 179

  Fly   129 SDKFLVC--APRFYSINNENDYNNGMC---------------------YWLSDTPKNIDS----- 165
            |.||...  |..|.::.:.|||..|..                     |.|.:...|:.|     
Zfish   180 SIKFAAVQFATTFSTVFDFNDYQLGSAEQKLQKEKHMSALTNTHGAIKYVLENLLNNVSSGANPK 244

  Fly   166 -----TEVMEKWPLRIEKKQVLKLADTNLIPYYSMGELGLS------------------------ 201
                 ..:.:..|...:.:.||:..|...|..|.:|..||:                        
Zfish   245 AQHALVIITDGDPTDRDNEHVLEKCDKQNILRYIIGVGGLANLARLTSLASEPKHNNTFFIKDYK 309

  Fly   202 ---------------------AHVSD--------------DNSKLLMGAPGIDQWKGSVHLKQEV 231
                                 ||..|              ....:::|:.|.:.|:||::   ||
Zfish   310 GLEGLLDNLQKKIYNIEGSTEAHSKDRLKELSQSGFSVINHKDSVIVGSVGSNDWRGSLY---EV 371

  Fly   232 PSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGN 296
                |.||   .|:.        ..|.::....:.||.||:...|    :........:.|||..
Zfish   372 ----TGSG---SGVK--------ETEIRDPFVSKDSYMGYSAVLG----ARAGVSFLFSGAPRAE 417

  Fly   297 NQFGEAYIFDIYEDSIYKYH-EFRGNHFGEYFGYSVLAEDLNGDGKTD-VIISAPLYALRNSYDD 359
            : .|...:| |..||.::.. ...|...|.|||.|:...|::.||.:| :::.|||:.......:
Zfish   418 H-MGLVTLF-IKNDSSWRVSWNISGEQIGSYFGASLSLLDVDSDGDSDFLLVGAPLFHQSQPRAE 480

  Fly   360 GAIYVF-INKGSFTFEERIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAPFA--GNGSVFIY 421
            |.:||: .:.|.|   ::::.....:.|||..:|:.:.|:|.|..:|||||||..  |.|.|:||
Zfish   481 GKLYVYTFSDGPF---QKMLNVSGSNIGRFSASLASLKDLNGDSLSDVAVGAPLENDGEGVVYIY 542

  Fly   422 LGSENGLR----DPPSQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLY 482
            ||  :|:|    :...|.:...|..|   |...||..||...|:..:...|..|||..  .:.|.
Zfish   543 LG--DGMRGINLNHAPQRISGRSVLP---GLQQFGVSLSGQMDMSDDNLTDVVIGARG--GMVLL 600

  Fly   483 RAYPV--VKIHAIIKPKLQNVN----PEEERVNI---TVCYRLSSKSDSKAKALMEQELVIRIDI 538
            :|.||  |.:.....|...|:|    |.::.:|:   |.|:.:..::.|......:..:.:.:::
Zfish   601 KARPVMSVSVQLSFSPNEINLNYFECPSDKVLNVFNLTSCFTMKEQTSSNGSLDKKLNVSLELNV 665

  Fly   539 DTKSKIKLAVFDEEHGSQMSFKAKAFHEEI-------CSEFQIEMDKRAKFT--PIALEMQYELS 594
            |....|....|.:...|     :||..:.:       |..|.:.|......|  |:.:.|.:..|
Zfish   666 DVMRGINRGFFVQRDSS-----SKALQQLLLLDSGIFCRSFPVFMPGCVADTVSPLKIRMNFSQS 725

  Fly   595 KKIPNSGDFCEDCAVVDPAEPKFVTEY--ITFNTGC-ATDVCVADLKISCINASSTLVLGTTAVL 656
            :...:|      .||:|....  ..||  :.|...| :.:.||||||:.....::|||:...|..
Zfish   726 EMSGSS------VAVLDVYSR--TEEYVEVPFQRNCNSNNSCVADLKLDFSFRNNTLVVANQAHF 782

  Fly   657 RLTYNITNNGEFAYHPKFSVTNSAGLSLAQVPGNCKVNEAVMVCDLNHGQRMAKGDTDSLTISFD 721
            .|..::.|.|:.:::....:....||||:... ..|.:.....|    |.| ..|.|:..|.|.:
Zfish   783 TLLISLENPGDDSFNTSIVLHYPDGLSLSNFL-TVKPSRTRSSC----GDR-DSGATNRTTCSIN 841

  Fly   722 VRQLR-GRSLEIQA------------EVLSARDESNPENNKLTNVLSLREKADIYVSGVQTNDHV 773
            :...| |.:.:.||            :::.....:|.:||..|:..::|....:..:       |
Zfish   842 LPVYRSGTTTQFQATFRVSKWDYDWSDMMEMMITANSDNNGNTSAAAVRRSVPVQFA-------V 899

  Fly   774 VLKESPYTAEVVNY--YEIKSHGPSTL------ENL-------TVSLYIPVAYKTP--------- 814
            .:..|....:.|.|  :.::..||..|      |||       .|||::|.. .||         
Zfish   900 DVAISLSAEDSVTYLNFSLEDRGPKPLRIVYKVENLGVKGLPVRVSLHLPCP-TTPVRLSKQKFS 963

  Fly   815 ---DSTNVKHIVTSSPKIQSKYAHKIMPINF-IDQNNALANNFAIDHDQSTLLFSATPQHENVGN 875
               :||:|  ..|||   :..:...|....| :|:::.:  .|.:..|.:   |.:..::|:   
Zfish   964 VQQNSTDV--ACTSS---EDDHCETIECSQFHLDKHSVV--QFILTADAT---FQSVKEYES--- 1015

  Fly   876 LSGIVEQNPSISLLNEDLPVNNTLVLNCQDTNVTLCVPVEIRLENGLQLKPEELMNMTVSFTVNL 940
                   ..|...|.:|..:|.:..||...:.                      .|.|   :..|
Zfish  1016 -------KFSFQELRKDFSLNISAELNYNRSR----------------------YNQT---STGL 1048

  Fly   941 KDADDIWEYFVIQTDLKVHKIGDPTLSSFTIEKKIESNVICKHAEIAI---WKIIVSVIVG---- 998
            ||                    ||..|..|::           ||..:   ..:|:||..|    
Zfish  1049 KD--------------------DPHKSQITVK-----------AEFVLPPNRMLIISVGAGGGLI 1082

  Fly   999 --ILVFSAATYALYKRGFFKR-------AIKDDLKQLIRDSFEDGIIRTEMEENA 1044
              |::|    :.|.|.|||||       :..||:..|.....:..::.|:.::.|
Zfish  1083 LLIIIF----FLLVKCGFFKRRRPEEFPSQTDDVSALENSPEDSPLMDTDAKDGA 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 21/74 (28%)
Int_alpha 384..434 CDD:214549 23/55 (42%)
Int_alpha 447..>492 CDD:214549 15/46 (33%)
Integrin_alpha2 486..808 CDD:462478 79/370 (21%)
zmp:0000001082NP_001373553.1 vWFA 145..314 CDD:469594 30/170 (18%)
Int_alpha 443..491 CDD:214549 15/47 (32%)
Int_alpha 505..>546 CDD:214549 21/42 (50%)
Integrin_alpha2 603..951 CDD:462478 80/373 (21%)

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