DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and itga6l

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:XP_021336955.3 Gene:itga6l / 555254 ZFINID:ZDB-GENE-040914-57 Length:1035 Species:Danio rerio


Alignment Length:1135 Identity:253/1135 - (22%)
Similarity:442/1135 - (38%) Gaps:242/1135 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFCLLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIR-------EKSIMVAA 58
            :|.||..|.:.|.:.:..:|:.  ..:|:.    :.....|.||||:.:.       ::.:::.|
Zfish     4 LFSLLFTVWIILPARVFVFNLD--TQNVMR----KRGEADSLFGFSMAMHHQLKPSDQRVLLIGA 62

  Fly    59 PRANSSLEAQRNISEPGVIFRCYFES-GNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFR---WLG 119
            |||.:......|||  |.::||.|.: .::|....:|.|...|..|        ..|:|   |||
Zfish    63 PRAKALPVQNANIS--GGLYRCKFTTQPDDCERIPVDIKARSKDHP--------GVDYRENQWLG 117

  Fly   120 GAMDGGTRDSDKFLVCAPRFYSINNENDYNNGMCYWL-SDTPKNIDSTEVMEKWPLRIEKKQVLK 183
            .::....| ..|.:.||.|:...:..|....|.|:.| .|.....|..:.          :...:
Zfish   118 VSVQSQGR-GGKVVTCAHRYQDWSFTNQRLLGRCFVLGQDLVLGTDGADT----------RSFCR 171

  Fly   184 LADTNLIPYYSMG--ELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQ-EVPSIKTSSGRQRRGM 245
            ..:|:   .::.|  :.|||...|.|:..|:.||||...|||.||::. |..|::.......   
Zfish   172 TRETD---KHNFGYCQQGLSVAFSKDSKYLVYGAPGAYDWKGIVHMEPVEDFSLEIYETADE--- 230

  Fly   246 NTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNL---STVLYVATAPRGNNQFGEAYIFDI 307
                  :|.||      .:..|:.|:|:.:|    .||   ..:..||.|||.|:. ||..:.. 
Zfish   231 ------HELNP------VDISSFLGFALDTG----MNLMKKGELNVVAGAPRSNHS-GEVLLLR- 277

  Fly   308 YED-----SIYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALRNSYDD--GAIYVF 365
            .||     ::...|..||......|||.:...|||.||..|:::.||.::.:|..||  ||:|::
Zfish   278 PEDRTEARNLQVEHILRGPGLASSFGYDLTILDLNADGWDDIVVGAPEFSSKNMDDDVGGAVYIY 342

  Fly   366 INKGS----FTFEERIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAP--FAGNGSVFIYLGS 424
            ||:..    ..|:...:.....|  .||..::.:||:|:|||.|.|..||  .:|.|.|:||.||
Zfish   343 INQAEGQHWSHFQPVCLYGKKDS--MFGLAVAHVGDLNQDGYQDFAASAPNEDSGRGRVYIYHGS 405

  Fly   425 ENGLRDPPSQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVK 489
            ..|....|: .|||     ..:...:||:.|:...|:||||:.:.|:|: .::.|.:||..||:.
Zfish   406 AAGFHHKPT-ILDA-----GDHSIKLFGYSLAGNMDMDGNGYPELAVGS-FSDTVLIYRTKPVIN 463

  Fly   490 IHAI-------IKPKLQNVNPEEERVNITVCYRLSSKSDS-KAKALMEQEL---VIRIDIDTKSK 543
            |...       |..|.|:...:...:....|:..:::..: ..|..:|.:|   .:|.:....|:
Zfish   464 IEKTLTLTPNKIDFKAQDCKRKPCIITAQSCFTYTTEPQTYNPKLRIEYKLEADTVRRERGLPSR 528

  Fly   544 IKLAVFDEEHGSQMSFKAKAFHEEICSEFQIEM--DKRAKFTPIALEMQYEL-----SKKIPNSG 601
            :.....|..:|.|   :.||..::.|.:.::.:  :.:.|.|.|::.:...|     .:.|.|..
Zfish   529 VVFVNSDAANGRQ---QLKAQRQKSCVQTKLRLLGEIQDKLTSISISLSVSLPSDNPKQTIRNLP 590

  Fly   602 DFCEDCAVVDPAEPKFVTEYITF-NTGCATD-VCVADLKIS---CINASS-------TLVLGTTA 654
            |.   ..|::..:.|.....::| |:||.:| :|.::|::.   |.....       .:..|...
Zfish   591 DL---EPVLNTLQEKTSKAEVSFLNSGCGSDNICQSNLQLQYSFCTKDQQQDQCDPLAMENGVPV 652

  Fly   655 V------LRLTYNITN-NGEFAYHPKFSVTNSAGLSLAQV--------PGNCKVNEAVMVCDLNH 704
            :      :.|...:|| .|:.|:|.:..|.....|.|..|        ...|..||.....|...
Zfish   653 ISPGDVNIALEVTVTNTGGDDAHHTQLYVMFPEVLHLTSVVPKKNSVTQVQCNPNENRTQADCQL 717

  Fly   705 GQRMAKGDTDSLTISFDVRQLRGR----SLEIQAEVLSARD------ESNPENNKLTNVLSLREK 759
            |..:.:....|..:..:..:|..|    ::.:..:.:|.:|      |:........|::.|.:.
Zfish   718 GNPLKRDAEVSFFLMLNTEKLSLRVTSANVTLALKTISIQDVPIVVAEAKIIFELHLNIIGLAKP 782

  Fly   760 ADIYVSGVQTNDHVVLKESPYTAEVVNY--------YEIKSHGPSTLENLTVSLYIPVAYK---- 812
            :.::..| :..|...:|.......:|.|        ..:||.|.:.|     ::..|.|.|    
Zfish   783 SQLFFGG-EVKDEKAMKAEDDVGSLVQYEFRIFNIGRPLKSFGSAVL-----NIQWPKATKAGKR 841

  Fly   813 -------TPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQH 870
                   |....|:.|...|                  :..|.|..|.|....:..|        
Zfish   842 LLYLMQITDRGKNIIHCTPS------------------EAINTLRFNMASSRGKREL-------- 880

  Fly   871 ENVGNLSGIVEQNPSISLLNEDLPVNNTLVLNCQD--TNVTLCVPVEIRLENGLQLKPEELMNMT 933
            |....|..:...:.....|...   .....|.|.|  :.|.|..|:|....:.:.|....|.|.|
Zfish   881 ERESGLKALASTSDFFPFLGNK---RKYKTLTCADELSCVELRCPLEALDSSAVILLHARLWNNT 942

  Fly   934 VSFTVNLKDADDIWEY-------FVIQTDLKVH----KIG-DPTLSSFTIEKKIESNVICKH--- 983
            .           :.||       .::...|.::    .|| .|:      :.|::..|..:.   
Zfish   943 F-----------LQEYSSLNYLDIILNASLTLNGTQGNIGMQPS------DTKVKLTVFAERRPA 990

  Fly   984 --AEIAIWKIIVSVIVGILVFSAATYALYK 1011
              :.:..|.|::||:..:|:.:...|.|:|
Zfish   991 LLSRVPWWLILLSVVTALLLLALLFYLLWK 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 27/78 (35%)
Int_alpha 384..434 CDD:214549 22/51 (43%)
Int_alpha 447..>492 CDD:214549 16/44 (36%)
Integrin_alpha2 486..808 CDD:462478 68/384 (18%)
itga6lXP_021336955.3 None

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