DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and itga9

DIOPT Version :9

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001311427.1 Gene:itga9 / 394012 ZFINID:ZDB-GENE-040426-1129 Length:1032 Species:Danio rerio


Alignment Length:1187 Identity:293/1187 - (24%)
Similarity:486/1187 - (40%) Gaps:313/1187 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLV--IREKS--IMVAAPRANSSLE 66
            |.|.|...|...::||.      |.:|.:.....:::||:|::  :.:.:  |:|.|||||||..
Zfish    18 VFVCLCSVSLAYSFNID------LQYPVVFRGPDATFFGYSVLEHVHDNTRWIVVGAPRANSSFS 76

  Fly    67 AQRNISEPGVIFRCYFESG--NNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDS 129
            :  ::..||.:::|...:.  ..|:..::. :|| |...:.|.....:::..|:|.::....:.:
Zfish    77 S--SVQSPGAVYKCRIRNNPEQRCTEMDLG-RGN-KQRESCGKTCQGDRNDEWMGVSLARQNKPN 137

  Fly   130 DKFLVCAPRFYSINNENDY--NNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPY 192
            .|.|.||.|:.::..|::|  .:|.|   |..|.|:..            |.|       .|||.
Zfish   138 GKILACAHRWKNVYYESEYILPHGYC---SIIPANLQG------------KSQ-------PLIPC 180

  Fly   193 Y-----SMGE------LGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMN 246
            |     :.||      .|::...:::  .::|||||...|.|:|.:..     .||        |
Zfish   181 YEDHKKTYGEEHGSCQAGIAGVFTEE--LVVMGAPGSYYWTGTVKVFN-----MTS--------N 230

  Fly   247 TNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDS 311
            |:...|:.:..|     ..:||.||||::|:|.|.|  |:...|.||:.:.. |:.|:|.|...:
Zfish   231 THYNLNQDDLSP-----HRYSYLGYAVTAGHFSSPN--TIDVAAGAPQDSGG-GKVYVFRIEGTA 287

  Fly   312 IYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYA-LRNSYDDGAIYVFINKGSFTFEE 375
            :.|..:..|...|.|||.|:.|.|||.||.:|:::.||::: :|   |:|.:.|:::.|:...||
Zfish   288 LVKIFQASGKMMGSYFGSSLCAVDLNADGLSDLLVGAPMHSEIR---DEGQVSVYLSSGNGVMEE 349

  Fly   376 -RIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAPFAGN--GSVFIYLGSENGLRDPPSQCLD 437
             .|:.........||..::.:|||:.|||.|||:|||...:  |:|:||.|...|:.:..|..|.
Zfish   350 VAILNGDNAYNAHFGECITSLGDIDDDGYQDVAIGAPEEDDYGGAVYIYHGDARGIVNKYSMRLS 414

  Fly   438 APSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIH-AIIKPKLQNV 501
            ..|..|:   ..|||..:|...|:||||:.|..|||..|::|.|.|:.||:.:. :|..|...|:
Zfish   415 GRSINPT---LQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSRPVISVDVSIFLPVSINI 476

  Fly   502 -------NPEE-ERVNITVC---------------YRLSSKSDSKAKALMEQELVIRIDIDTKSK 543
                   .|:. ...|:|||               |.|::.||.:.|.|..:             
Zfish   477 TVPQCHEGPQHLNCFNVTVCMSFRGKHVPGHIELLYNLTADSDKRHKGLPPR------------- 528

  Fly   544 IKLAVFDEEHGSQMSFKAKAF----HEEICSEFQIEMDKRAK--FTPIALEMQYELSKKIPNSGD 602
               |.|. ..|.|....::.|    |.:.|.::...:.|..|  |..|..|..|.|.|.|.:...
Zfish   529 ---AYFG-NGGEQTGVVSQRFNLEIHRQQCHQYTAFVRKEVKDVFAAIVFEAAYSLGKHIVDEHQ 589

  Fly   603 FCEDCAVVDPAEP--------KFVTEYIT-FNTGCATDVCVADLK------ISCINASSTLVLGT 652
            ..:    :.|..|        |...:..| |...|.:|.|.|||:      :|....||.|.||.
Zfish   590 DRD----LPPLSPILRWKKGEKIAAKNETWFEKNCLSDDCAADLQLHGKLLLSGRYISSHLALGG 650

  Fly   653 TAVLRLTYNITNNGEFAYHPKFSVTNSAGLSLAQVPGNCKVNEAVMVCDLNHGQRMAKG------ 711
            ...:.|...|:|.|:.||..                 |...|.:..|..:|..||..||      
Zfish   651 VKNVSLNLTISNAGDDAYDT-----------------NIYFNFSKEVHYINFLQREEKGISCMLV 698

  Fly   712 DTDSLTIS-----------------FDVRQLRGRSLEIQAEVLSARDESNPE------NNKLTNV 753
            :.|.|..|                 ||..:|.|.: |....::.|| .:|||      :|.|...
Zfish   699 ELDFLKCSVGFPFMRAQTKYHISALFDTSRLSGEN-ETLLFLVHAR-SANPEHDNTLHDNTLELS 761

  Fly   754 LSLREKAD------------IYVSGVQTNDHVVLKESPYTAEVVNY-YEIKSHGPSTLENLTVSL 805
            :.|..:.|            :|.:.|..:..|.|::...:.:.:|: :::.::|||.|....|.:
Zfish   762 IPLVHEVDTTITGVVNPTSFVYGNSVDRSRFVQLEDMECSFQPLNFTFQVINNGPSRLPGSRVDI 826

  Fly   806 YIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQH 870
            .||           ..:..|.|::          .:.||                      |...
Zfish   827 RIP-----------HRLAGSGPEM----------FHIID----------------------TQVS 848

  Fly   871 ENVGNLSGIVEQNPSISLLNEDL-PVNNTL----------VLNCQDTNVTLCVPVEIRLENGLQL 924
            :..||.:.  .:||....:.:|. .:.:|:          ||:| |.....|:.:...|  |.|.
Zfish   849 DARGNCTW--HRNPKPCTIPQDKESIFHTIFAFFTKSGRKVLDC-DRPGRACLTISCSL--GSQA 908

  Fly   925 KPEELMNMTVSFTVNL----KDADDIWEYFV---IQTDLKVHKI--GDPTLSSFTIEKKIESNVI 980
            | ||..::.|...:|.    :|:..:.::..   :|.|.:..::  |.|...|..:|        
Zfish   909 K-EEATSIDVQMLLNTEILQRDSSSVIQFVTRGHVQLDDRTVEVSSGLPDDISLVME-------- 964

  Fly   981 CKHAE-----IAIWKIIVSVIVGILVFSAATYALYKRGFFKRAIKDDLKQLIRDSFEDGIIRTEM 1040
            ..|::     :..|.|.:|::||||:|......|:|.|||:|..::.:               |.
Zfish   965 ALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREII---------------EA 1014

  Fly  1041 EENAQSQGDADLDEKLD 1057
            |:|.:     |.||..|
Zfish  1015 EKNRK-----DSDESWD 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 VCBS 335..408 CDD:290251 26/74 (35%)
Int_alpha 384..434 CDD:214549 20/51 (39%)
Int_alpha 447..>492 CDD:214549 19/45 (42%)
Integrin_alpha2 484..808 CDD:285619 90/410 (22%)
itga9NP_001311427.1 Int_alpha 45..93 CDD:214549 15/49 (31%)
Int_alpha 245..293 CDD:214549 19/50 (38%)
Int_alpha 299..345 CDD:214549 19/48 (40%)
Int_alpha 360..413 CDD:214549 21/52 (40%)
Int_alpha 423..>465 CDD:214549 19/41 (46%)
Integrin_alpha2 458..902 CDD:285619 108/529 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574946
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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