DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and itga9

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001311427.1 Gene:itga9 / 394012 ZFINID:ZDB-GENE-040426-1129 Length:1032 Species:Danio rerio


Alignment Length:1187 Identity:293/1187 - (24%)
Similarity:486/1187 - (40%) Gaps:313/1187 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLV--IREKS--IMVAAPRANSSLE 66
            |.|.|...|...::||.      |.:|.:.....:::||:|::  :.:.:  |:|.|||||||..
Zfish    18 VFVCLCSVSLAYSFNID------LQYPVVFRGPDATFFGYSVLEHVHDNTRWIVVGAPRANSSFS 76

  Fly    67 AQRNISEPGVIFRCYFESG--NNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDS 129
            :  ::..||.:::|...:.  ..|:..::. :|| |...:.|.....:::..|:|.::....:.:
Zfish    77 S--SVQSPGAVYKCRIRNNPEQRCTEMDLG-RGN-KQRESCGKTCQGDRNDEWMGVSLARQNKPN 137

  Fly   130 DKFLVCAPRFYSINNENDY--NNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPY 192
            .|.|.||.|:.::..|::|  .:|.|   |..|.|:..            |.|       .|||.
Zfish   138 GKILACAHRWKNVYYESEYILPHGYC---SIIPANLQG------------KSQ-------PLIPC 180

  Fly   193 Y-----SMGE------LGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMN 246
            |     :.||      .|::...:::  .::|||||...|.|:|.:..     .||        |
Zfish   181 YEDHKKTYGEEHGSCQAGIAGVFTEE--LVVMGAPGSYYWTGTVKVFN-----MTS--------N 230

  Fly   247 TNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDS 311
            |:...|:.:..|     ..:||.||||::|:|.|.|  |:...|.||:.:.. |:.|:|.|...:
Zfish   231 THYNLNQDDLSP-----HRYSYLGYAVTAGHFSSPN--TIDVAAGAPQDSGG-GKVYVFRIEGTA 287

  Fly   312 IYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYA-LRNSYDDGAIYVFINKGSFTFEE 375
            :.|..:..|...|.|||.|:.|.|||.||.:|:::.||::: :|   |:|.:.|:::.|:...||
Zfish   288 LVKIFQASGKMMGSYFGSSLCAVDLNADGLSDLLVGAPMHSEIR---DEGQVSVYLSSGNGVMEE 349

  Fly   376 -RIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAPFAGN--GSVFIYLGSENGLRDPPSQCLD 437
             .|:.........||..::.:|||:.|||.|||:|||...:  |:|:||.|...|:.:..|..|.
Zfish   350 VAILNGDNAYNAHFGECITSLGDIDDDGYQDVAIGAPEEDDYGGAVYIYHGDARGIVNKYSMRLS 414

  Fly   438 APSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIH-AIIKPKLQNV 501
            ..|..|:   ..|||..:|...|:||||:.|..|||..|::|.|.|:.||:.:. :|..|...|:
Zfish   415 GRSINPT---LQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSRPVISVDVSIFLPVSINI 476

  Fly   502 -------NPEE-ERVNITVC---------------YRLSSKSDSKAKALMEQELVIRIDIDTKSK 543
                   .|:. ...|:|||               |.|::.||.:.|.|..:             
Zfish   477 TVPQCHEGPQHLNCFNVTVCMSFRGKHVPGHIELLYNLTADSDKRHKGLPPR------------- 528

  Fly   544 IKLAVFDEEHGSQMSFKAKAF----HEEICSEFQIEMDKRAK--FTPIALEMQYELSKKIPNSGD 602
               |.|. ..|.|....::.|    |.:.|.::...:.|..|  |..|..|..|.|.|.|.:...
Zfish   529 ---AYFG-NGGEQTGVVSQRFNLEIHRQQCHQYTAFVRKEVKDVFAAIVFEAAYSLGKHIVDEHQ 589

  Fly   603 FCEDCAVVDPAEP--------KFVTEYIT-FNTGCATDVCVADLK------ISCINASSTLVLGT 652
            ..:    :.|..|        |...:..| |...|.:|.|.|||:      :|....||.|.||.
Zfish   590 DRD----LPPLSPILRWKKGEKIAAKNETWFEKNCLSDDCAADLQLHGKLLLSGRYISSHLALGG 650

  Fly   653 TAVLRLTYNITNNGEFAYHPKFSVTNSAGLSLAQVPGNCKVNEAVMVCDLNHGQRMAKG------ 711
            ...:.|...|:|.|:.||..                 |...|.:..|..:|..||..||      
Zfish   651 VKNVSLNLTISNAGDDAYDT-----------------NIYFNFSKEVHYINFLQREEKGISCMLV 698

  Fly   712 DTDSLTIS-----------------FDVRQLRGRSLEIQAEVLSARDESNPE------NNKLTNV 753
            :.|.|..|                 ||..:|.|.: |....::.|| .:|||      :|.|...
Zfish   699 ELDFLKCSVGFPFMRAQTKYHISALFDTSRLSGEN-ETLLFLVHAR-SANPEHDNTLHDNTLELS 761

  Fly   754 LSLREKAD------------IYVSGVQTNDHVVLKESPYTAEVVNY-YEIKSHGPSTLENLTVSL 805
            :.|..:.|            :|.:.|..:..|.|::...:.:.:|: :::.::|||.|....|.:
Zfish   762 IPLVHEVDTTITGVVNPTSFVYGNSVDRSRFVQLEDMECSFQPLNFTFQVINNGPSRLPGSRVDI 826

  Fly   806 YIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQH 870
            .||           ..:..|.|::          .:.||                      |...
Zfish   827 RIP-----------HRLAGSGPEM----------FHIID----------------------TQVS 848

  Fly   871 ENVGNLSGIVEQNPSISLLNEDL-PVNNTL----------VLNCQDTNVTLCVPVEIRLENGLQL 924
            :..||.:.  .:||....:.:|. .:.:|:          ||:| |.....|:.:...|  |.|.
Zfish   849 DARGNCTW--HRNPKPCTIPQDKESIFHTIFAFFTKSGRKVLDC-DRPGRACLTISCSL--GSQA 908

  Fly   925 KPEELMNMTVSFTVNL----KDADDIWEYFV---IQTDLKVHKI--GDPTLSSFTIEKKIESNVI 980
            | ||..::.|...:|.    :|:..:.::..   :|.|.:..::  |.|...|..:|        
Zfish   909 K-EEATSIDVQMLLNTEILQRDSSSVIQFVTRGHVQLDDRTVEVSSGLPDDISLVME-------- 964

  Fly   981 CKHAE-----IAIWKIIVSVIVGILVFSAATYALYKRGFFKRAIKDDLKQLIRDSFEDGIIRTEM 1040
            ..|::     :..|.|.:|::||||:|......|:|.|||:|..::.:               |.
Zfish   965 ALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRHYREII---------------EA 1014

  Fly  1041 EENAQSQGDADLDEKLD 1057
            |:|.:     |.||..|
Zfish  1015 EKNRK-----DSDESWD 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 26/74 (35%)
Int_alpha 384..434 CDD:214549 20/51 (39%)
Int_alpha 447..>492 CDD:214549 19/45 (42%)
Integrin_alpha2 486..808 CDD:462478 90/408 (22%)
itga9NP_001311427.1 Int_alpha 45..93 CDD:214549 15/49 (31%)
Int_alpha 245..293 CDD:214549 19/50 (38%)
Int_alpha 299..345 CDD:214549 19/48 (40%)
Int_alpha 360..413 CDD:214549 21/52 (40%)
Int_alpha 423..>465 CDD:214549 19/41 (46%)
Integrin_alpha2 459..907 CDD:462478 110/535 (21%)

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