DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and ITGAV

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_002201.2 Gene:ITGAV / 3685 HGNCID:6150 Length:1048 Species:Homo sapiens


Alignment Length:1144 Identity:282/1144 - (24%)
Similarity:466/1144 - (40%) Gaps:227/1144 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIREKS------IMVAAPRAN 62
            ||..:||.|   ..|:|:.....:..:.||      .|||||::.....|      ::|.||:||
Human    19 LLSGLLLPL---CRAFNLDVDSPAEYSGPE------GSYFGFAVDFFVPSASSRMFLLVGAPKAN 74

  Fly    63 SSLEAQRNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTR 127
            ::   |..|.|.|.:.:|.:.|...|.|...|..||.....:|.|   :.|..:|.|.::   ..
Human    75 TT---QPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPL---EFKSHQWFGASV---RS 130

  Fly   128 DSDKFLVCAPRFY---SINNENDYNNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNL 189
            ..||.|.|||.::   .:..|.: ..|.|:..       |.|:.:|..|.|.:...    ||.. 
Human   131 KQDKILACAPLYHWRTEMKQERE-PVGTCFLQ-------DGTKTVEYAPCRSQDID----ADGQ- 182

  Fly   190 IPYYSMGELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNEC 254
              .:..|...:....:|   ::|:|.||...|:|.: :..:|..|.:........:..|      
Human   183 --GFCQGGFSIDFTKAD---RVLLGGPGSFYWQGQL-ISDQVAEIVSKYDPNVYSIKYN------ 235

  Fly   255 NPEPKNFGQEEF--SYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIYKYHE 317
            |.......|..|  ||.||:|:.|.|:...:..  :|:..||.....|..||:|  ..::...:.
Human   236 NQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDD--FVSGVPRAARTLGMVYIYD--GKNMSSLYN 296

  Fly   318 FRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALRNS----YDDGAIYVFINKGSFTFEERII 378
            |.|.....|||:||.|.|:|||...||.|.|||:..|.|    .:.|.:.|.:.:.|..|:...:
Human   297 FTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKL 361

  Fly   379 RSPAGSG----GRFGTTLSRIGDINKDGYNDVAVGAPFAG---NGSVFIYLGSENGLRDPPSQCL 436
                 :|    .|||:.::.:||:::||:||:|:.||:.|   .|.|:|:.|...||...|||.|
Human   362 -----NGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQIL 421

  Fly   437 D----APSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHAIIKPK 497
            :    |.|..||      ||:.:...:|||.||:.|..:||...:...||||.||:.::|.::..
Human   422 EGQWAARSMPPS------FGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVY 480

  Fly   498 LQNVNPEEER------------VNITVCYRLSSKSDSKAKALMEQELVIRIDIDTKSKIKLAVF- 549
            ...:|.:.:.            .|:..|.:...|.....|...:.||::. .:..|..|:.|:| 
Human   481 PSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLD-KLKQKGAIRRALFL 544

  Fly   550 ---DEEHGSQMSFKAKAFH--EEICSEFQIEMDKRAKFTPIALEMQYELSKKIPNSGDFCEDCAV 609
               ...|...|:.......  ||:.:..:.|.:.|.|.|||.:.|:|.|..:  .:.|......:
Human   545 YSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYR--TAADTTGLQPI 607

  Fly   610 VDPAEPKFVTEYITFNTGCATD-VCVADLKISCINASSTLVLGTTAVLRLTYNITNNGEFAYHPK 673
            ::...|..::........|..| ||...|::|..:....:.:|....|.|.....|.||.||..:
Human   608 LNQFTPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYEAE 672

  Fly   674 FSVTNSAGLSLAQVPGNCKVNEAV---------------MVCDLNHGQRMAKGDTDSLTISFDVR 723
            ..|  |..|. |...|..:.|||:               :||||  |..|..|......:.|.|.
Human   673 LIV--SIPLQ-ADFIGVVRNNEALARLSCAFKTENQTRQVVCDL--GNPMKAGTQLLAGLRFSVH 732

  Fly   724 QL--RGRSLEIQAEVLSAR--DESNPENNKLTNVLSLREKADIYVSGVQTNDHVVL-------KE 777
            |.  ...|::...::.|:.  |:.:|   .:::.:.|...|.:.:.||.:.|||.|       ||
Human   733 QQSEMDTSVKFDLQIQSSNLFDKVSP---VVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEHKE 794

  Fly   778 SPYTAE-----VVNYYEIKSHGPSTLENLTVSLYIPVAYKTPDSTNVKHI-------VTSSPKIQ 830
            :|.|.|     |.:.||::::|||:.....:.|..|..|.......:.|.       .||..:| 
Human   795 NPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEI- 858

  Fly   831 SKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVEQNPSISLLNEDLPV 895
            :....||..:...::|:.:|.....||                             .:...||.:
Human   859 NPLRIKISSLQTTEKNDTVAGQGERDH-----------------------------LITKRDLAL 894

  Fly   896 N--NTLVLNCQDTNVTLCVPVEI---RLENG----LQLK----PEELMNM-TVSFTVNLKDADDI 946
            :  :...|.|   .|..|:.:..   ||:.|    |.:|    .|..||. ..:.:.:||.:.  
Human   895 SEGDIHTLGC---GVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSA-- 954

  Fly   947 WEYFVIQ---TDLKVHKIGDPTLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGILVFSAATYA 1008
             .:.||:   .:|.:..|.:.||.:..:...|:...:    .:.:|.||::|:.|:|:.:...:.
Human   955 -SFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPM----PVPVWVIILAVLAGLLLLAVLVFV 1014

  Fly  1009 LYKRGFFKRAIKDDLKQLIRDSFEDGIIRTEMEENAQSQ 1047
            :|:.|||||                  :|...||..:.|
Human  1015 MYRMGFFKR------------------VRPPQEEQEREQ 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 26/80 (33%)
Int_alpha 384..434 CDD:214549 21/56 (38%)
Int_alpha 447..>492 CDD:214549 16/44 (36%)
Integrin_alpha2 486..808 CDD:462478 85/371 (23%)
ITGAVNP_002201.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 32..98 20/74 (27%)
Int_alpha 46..103 CDD:214549 19/59 (32%)
WD40 repeat 51..120 CDD:293791 20/74 (27%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..170 17/74 (23%)
WD40 repeat 126..183 CDD:293791 16/74 (22%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 173..225 13/62 (21%)
WD40 repeat 188..248 CDD:293791 12/69 (17%)
FG-GAP_3 221..271 CDD:433275 12/57 (21%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 237..291 16/57 (28%)
Int_alpha 248..>288 CDD:214549 14/43 (33%)
WD40 repeat 254..298 CDD:293791 11/47 (23%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 292..357 23/64 (36%)
Int_alpha 302..355 CDD:214549 21/52 (40%)
WD40 repeat 307..362 CDD:293791 20/59 (34%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 358..415 20/61 (33%)
Int_alpha 367..421 CDD:214549 22/53 (42%)
WD40 repeat 371..422 CDD:293791 20/50 (40%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 419..482 23/68 (34%)
Int_alpha 434..476 CDD:214549 16/41 (39%)
Integrin_alpha2 468..914 CDD:462478 103/489 (21%)
GFFKR motif 1019..1023 3/3 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1027..1048 3/9 (33%)

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