Sequence 1: | NP_611025.2 | Gene: | ItgaPS4 / 36693 | FlyBaseID: | FBgn0034005 | Length: | 1069 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001381857.1 | Gene: | ITGA6 / 3655 | HGNCID: | 6142 | Length: | 1130 | Species: | Homo sapiens |
Alignment Length: | 1192 | Identity: | 280/1192 - (23%) |
---|---|---|---|
Similarity: | 458/1192 - (38%) | Gaps: | 283/1192 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 CLLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIR-------EKSIMVAAPR 60
Fly 61 ANSSLEAQRNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMD-- 123
Fly 124 --GGTRDSDKFLVCAPRF---YSINNENDYNN--GMCYWLSDTPKNIDSTEVME--KWPLRIEKK 179
Fly 180 QVLKLADTNLIPYYSMG--ELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQE------------ 230
Fly 231 -----------------VPS---------------------IKTSSGRQRRGMNTNRKCNECNPE 257
Fly 258 PKNFGQEEF-SYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIF--DIYEDSIYKYHEFR 319
Fly 320 GNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALRNSYDDGAIYVFINKGSFTFEERIIRSPAGS 384
Fly 385 GGRFGTTLSRIGDINKDGYNDVAVGAPFAGNGSVFIYLGSENGLRDPPSQCLDAPSQQPSKYGSY 449
Fly 450 MFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHAIIKPKLQNVNPEEERVNIT--- 511
Fly 512 -------VCYRLSSKSDSKAK-----------ALMEQELVIRIDIDTKSKIKLAVFDEEHGSQMS 558
Fly 559 F----KAKAFHEEICSE--FQIEMDKRAKFTPI----ALEMQYELSKKIPNSGDFCEDCAVVDPA 613
Fly 614 EPKFVTEYIT---FNTGCATD-VCVADLKIS---CINASS--------------TLVLGTTAVLR 657
Fly 658 LTYNITN----------NGEFAYHPKF------SVTNSAGLSLAQVPG---NCKVNE--AVMVCD 701
Fly 702 LNHGQRMAKGDTDSLTIS-----FDVRQLRGRSLEIQAEVLSARDESNPENNK-------LTNVL 754
Fly 755 SLREKADIYVSGVQTNDHVVLKESPYTAEVVNYYEIKSHGPSTLENL-TVSLYIPVAYKTPDSTN 818
Fly 819 VKHIVTSSPKIQSKYAHK--------IMPINFIDQNNALANNFAIDHDQSTLLFSATPQHENVGN 875
Fly 876 LSGIVEQNPSISLLNEDLPVNNTLVLNCQDTNVTLCVPVEIRLENGLQLKP-----EELMNMTVS 935
Fly 936 FTVNLKDADDIWEYFVIQTDLKVHKIGDPTLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGIL 1000
Fly 1001 VFSAATYALYKRGFFKRAIKDD 1022 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS4 | NP_611025.2 | VCBS | 335..408 | CDD:290251 | 29/72 (40%) |
Int_alpha | 384..434 | CDD:214549 | 26/49 (53%) | ||
Int_alpha | 447..>492 | CDD:214549 | 14/44 (32%) | ||
Integrin_alpha2 | 484..808 | CDD:285619 | 84/409 (21%) | ||
ITGA6 | NP_001381857.1 | FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 30..95 | 17/70 (24%) | |
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 101..166 | 19/72 (26%) | |||
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 176..229 | 15/52 (29%) | |||
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 283..339 | 15/72 (21%) | |||
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 340..402 | 23/61 (38%) | |||
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 403..458 | 27/54 (50%) | |||
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 459..518 | 21/74 (28%) | |||
Interaction with HPS5 | 1077..1083 | 4/5 (80%) | |||
GFFKR motif | 1079..1083 | 3/3 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165142032 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |