Sequence 1: | NP_611025.2 | Gene: | ItgaPS4 / 36693 | FlyBaseID: | FBgn0034005 | Length: | 1069 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006230331.1 | Gene: | Itgal / 308995 | RGDID: | 631424 | Length: | 1161 | Species: | Rattus norvegicus |
Alignment Length: | 1314 | Identity: | 267/1314 - (20%) |
---|---|---|---|
Similarity: | 446/1314 - (33%) | Gaps: | 455/1314 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 IVLLALQSEINA--YNI-SPYPNSVLNFPELEGNRRSSYFGFSLVIREKSIMVAAPRANSSLEAQ 68
Fly 69 RNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDK-- 131
Fly 132 FLVCAPRFYSINNENDYNNGMCYWLSD-------------------------------------- 158
Fly 159 -----------------------------------------------------TPK--------- 161
Fly 162 -----------------------------------NIDSTEVMEKWPLRIEK------------- 178
Fly 179 ------KQVLKLADT------------------------NLIPY-YSMGELGLSAHVSDDNSKLL 212
Fly 213 MGAPGIDQWKGS-VHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQEEFSYFGYAVSSG 276
Fly 277 YFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIY--KYHEFRGNHFGEYFGYSVLAEDLNGD 339
Fly 340 GKTD-VIISAPLYALRNSYDD---GAIYVFINKGS-FTFEERIIRSPAGSGGRFGTTLSRIGDIN 399
Fly 400 KDGYNDVAVGAPFAGNGSVFIYLGSENGLRDPPSQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGN 464
Fly 465 GFNDFAIGAPNAEAVYLYRAYPVVKIHAIIKPKLQNVNPEE-----------------ERVNITV 512
Fly 513 CYRLSS-KSDSKAKALMEQELVIRID-IDTKSKIKLAVFDEEHG---------SQMSFKAKAFHE 566
Fly 567 EICSEFQIEMDKRAKFTPIALEMQYELSKK--IPNSGDFCEDCAVVDPAEPKFVTEYITFNTGCA 629
Fly 630 TD-VCVADLKISCINASSTLVLGTTAVLRLTYNITNNGEFAYHPKFSVTNSAGLSL--------- 684
Fly 685 AQVPGNCK--VNEAVMV-----CDLNH-----GQRMAKGDTDSLTISFD--VRQLRGRSLEIQAE 735
Fly 736 VLSARDESN--PENNKLTNVLSLREKADIYVSGVQTNDHVVLKESPYTAEVVNYYEIKSHGPSTL 798
Fly 799 ENLTVSLYIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTL- 862
Fly 863 LFSATPQHENVGNL--SGIVEQNPSISLLNEDL---------PVNNTLVLNC-----QDTNVTLC 911
Fly 912 VPVEIRLENGLQLKPEELMNMTVSFTVNLKDADDIWEYFVIQTDLKVHKIGDPTLSSFTIEKKIE 976
Fly 977 SNVICK----HAEIAIWKIIVSVIVGILVFSAATYALYKRGFFKRAIKDDLKQLIRDSFEDGIIR 1037
Fly 1038 TEMEENAQSQGDAD 1051 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS4 | NP_611025.2 | VCBS | 335..408 | CDD:290251 | 28/77 (36%) |
Int_alpha | 384..434 | CDD:214549 | 22/49 (45%) | ||
Int_alpha | 447..>492 | CDD:214549 | 13/44 (30%) | ||
Integrin_alpha2 | 484..808 | CDD:285619 | 78/379 (21%) | ||
Itgal | XP_006230331.1 | Int_alpha | 38..81 | CDD:214549 | 12/52 (23%) |
vWFA | 151..320 | CDD:294047 | 10/168 (6%) | ||
Int_alpha | 398..448 | CDD:214549 | 14/53 (26%) | ||
Int_alpha | 453..499 | CDD:214549 | 17/50 (34%) | ||
Int_alpha | 514..566 | CDD:214549 | 24/51 (47%) | ||
Int_alpha | 577..621 | CDD:214549 | 12/50 (24%) | ||
Integrin_alpha2 | 609..977 | CDD:285619 | 93/446 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335719 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |