Sequence 1: | NP_611025.2 | Gene: | ItgaPS4 / 36693 | FlyBaseID: | FBgn0034005 | Length: | 1069 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006230276.1 | Gene: | Itgam / 25021 | RGDID: | 2926 | Length: | 1152 | Species: | Rattus norvegicus |
Alignment Length: | 1279 | Identity: | 255/1279 - (19%) |
---|---|---|---|
Similarity: | 460/1279 - (35%) | Gaps: | 399/1279 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLV-IREKSIMVAAPRANSSLEAQ 68
Fly 69 RNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDKFL 133
Fly 134 VCAPRFYSINNENDYNNGMCY----------------------------WLSDTPKNIDSTE--- 167
Fly 168 -------VMEKW------------------------------------PLR-----------IEK 178
Fly 179 -----------------KQVLKLAD-------------------TNLIPY--------------- 192
Fly 193 -------------------------------------------------YSMGELGLSAHVSDDN 208
Fly 209 SKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQEEFSYFGYAV 273
Fly 274 SSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIYKYHEFRGNHFGEYFGYSVLAEDLNG 338
Fly 339 DGKTD-VIISAPLYALRNSYD---DGAIYVF-INKGSFTFE--ERIIRSPAG-SGGRFGTTLSRI 395
Fly 396 GDINKDGYNDVAVGAP--FAGNGSVFIYLG-SENGLRDPPSQCLDAPSQQPSKYGSYMFGHGLSR 457
Fly 458 GSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHAIIKPKLQNV-------------NPEEERVN 509
Fly 510 ITVCYRLSSKSDSKAKALMEQELVIRIDIDTKSKIKLAVFDE-EHGSQMSFKAKAFHEEICSEFQ 573
Fly 574 IEMDKRA--KFTPIALEMQYEL-SKKIPNSGDFCEDCAVVDPAEPKFVTEYITFNTGCATD-VCV 634
Fly 635 ADLKISCINAS-STLVLGTTAVLRLTYNITNNGEFAYHPKFSVTNSAGLSLAQV----------- 687
Fly 688 ------PGNCKVNEAVM---VCDLNHGQRMAKGD-TDSLTISFDVRQLRGRSLEIQAEVLSARDE 742
Fly 743 SNPENNKLTNVLSLREKADIYV---SGVQTNDHVVLKESPYTAEVVNY-YEIKSHGPSTLENLTV 803
Fly 804 SLYIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATP 868
Fly 869 QHENVGNLSGIVEQNPSISLLNEDLPVNNTLVLNCQDTNVTLCVPVEIRLENGLQLKPEELMNMT 933
Fly 934 VSFTVNLKDADDIWEYFVIQTD------LKVHKI-----------GDPTLSSFTIEKKIESNVIC 981
Fly 982 KHAEIAIWKIIVSVIVGILVFSAATYALYKRGFFKRAIKDDLKQ 1025 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS4 | NP_611025.2 | VCBS | 335..408 | CDD:290251 | 25/80 (31%) |
Int_alpha | 384..434 | CDD:214549 | 21/52 (40%) | ||
Int_alpha | 447..>492 | CDD:214549 | 17/44 (39%) | ||
Integrin_alpha2 | 484..808 | CDD:285619 | 74/367 (20%) | ||
Itgam | XP_006230276.1 | vWA_integrins_alpha_subunit | 149..324 | CDD:238746 | 14/174 (8%) |
Int_alpha | 453..510 | CDD:214549 | 17/61 (28%) | ||
Int_alpha | 517..570 | CDD:214549 | 21/52 (40%) | ||
Int_alpha | 582..>606 | CDD:214549 | 9/23 (39%) | ||
Integrin_alpha2 | 615..1032 | CDD:285619 | 93/475 (20%) | ||
Integrin_alpha | 1129..1141 | CDD:278771 | 8/11 (73%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |