DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and Itga8

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001395029.1 Gene:Itga8 / 241226 MGIID:109442 Length:1079 Species:Mus musculus


Alignment Length:1149 Identity:291/1149 - (25%)
Similarity:477/1149 - (41%) Gaps:248/1149 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AYNISPYPNSVLNFPELEGNRRSSYFGFSLVI-----REKSIMVAAPRANSSLEAQRNISEPGVI 77
            |:|:.....:|.:.||      .||||:||..     |..|::|.||:||:|   |.:|.|.|.:
Mouse    37 AFNLDVDKLTVYSGPE------GSYFGYSLDFYIPDARTASVLVGAPKANTS---QPDIVEGGAV 92

  Fly    78 FRCYF--ESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDKFLVCAPRFY 140
            :.|.:  |....|.....||..|.|...|......:.|..:|.|..:   .....|.:.|||.::
Mouse    93 YYCPWPSERSAQCKQIPFDTTNNRKIRVNGTKEPIEFKSNQWFGATV---RAHKGKVVACAPLYH 154

  Fly   141 ----SINNENDYNNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPY---YSMGEL 198
                ..|...| ..|.||....     :.:...|..|.|          ::|..|.   |.....
Mouse   155 WRTLKPNPAKD-PVGTCYVAIQ-----NFSAYAEHSPCR----------NSNADPEGQGYCQAGF 203

  Fly   199 GLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQ 263
            .|..:   .|..|::|.||...|:|.|........|...|.:.........|..:..|     ..
Mouse   204 SLDFY---KNGDLIVGGPGSFYWQGQVITVSIADIIANYSFKDILRKLAAEKQTDVAP-----AS 260

  Fly   264 EEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIYKYHEFRGNHFGEYFG 328
            .:.||.||:|::|.|...:...:  ||..|||...||  |:..|....:.....|.|.....|||
Mouse   261 YDDSYLGYSVAAGEFTGDSQQEL--VAGIPRGAQNFG--YVSIINSTDMTFIQNFTGEQMASYFG 321

  Fly   329 YSVLAEDLNGDGKTDVIISAPLYALR----NSYDDGAIYVFINKGSFTFEERIIRSPAGSGGRFG 389
            |:|:..|:|.||..|:::.|||:..|    |..:.|.:|:::...:..|::..:.:...:.||||
Mouse   322 YTVVVSDVNNDGMDDILVGAPLFMEREFESNPREVGQVYLYLQASALLFQDPQVLTGTETFGRFG 386

  Fly   390 TTLSRIGDINKDGYNDVAVGAPFAG---NGSVFIYLGSENGLRDPPSQCLDAPSQQPSKYGSYM- 450
            ::::.:||:|:|||||:|:|.||||   .|.|.||.|:..||...|||.|.      ..:||.. 
Mouse   387 SSVAHLGDLNQDGYNDIAIGVPFAGKDQRGKVLIYNGNPRGLHSKPSQVLQ------GIWGSQTI 445

  Fly   451 ---FGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHA--IIKPKLQNVNPEEERV-- 508
               ||..|...:|||.|.:.|..:||.....|.:|||.|||.:.|  ::.|.:.|:..:..::  
Mouse   446 PSGFGFSLRGDADIDKNDYPDLLVGAFGKGKVAVYRARPVVTVDAQLLLHPMIINLENKTCQIPE 510

  Fly   509 --------NITVCYRLSSKSDSKAKALMEQELVIRID-IDTKSKIKLAVFDEEHGSQMSF----- 559
                    ::.||..::.:|.|...||:.:   :::| :..|..||..:|...|.|..:|     
Mouse   511 FPTPVACFSVRVCASIAGQSISNTIALLAE---VQLDFLKQKGAIKRTLFLHNHQSHFTFPFVMK 572

  Fly   560 KAKAFHEEICSEFQI----EMDKRAKFTPIALEMQYELSKKIPNSGDFCEDCAVVDPAEPK---- 616
            :.|:.|   |.:|.:    |.:.|.|.:||.:.:.|.|           :|....|..|.|    
Mouse   573 QQKSLH---CQDFMVYLRDETEFRDKLSPINISLNYSL-----------DDSTFKDSLEVKPILN 623

  Fly   617 -----FVTEYITFNTGCATD-VCVADLKISCINASSTLVLGTTAVLRLTYNITNNGEFAYHPKFS 675
                 .|||.......|..| :||.|||:|.......:::|....|.|..|..|.||.||..:..
Mouse   624 HYRDNVVTEQAHILVDCGEDNLCVPDLKLSARPDKHQIIIGDENHLMLIINARNEGEGAYEAELF 688

  Fly   676 V------------TNSAGLSLAQVPGNCKVN----EAVMVCDLNHGQRMAKGDTDSLTISFDVRQ 724
            |            .|:.||.    |.:|:..    ..::||||  |..|..|...||.:.|.|.:
Mouse   689 VIIPEEADYVGIERNNKGLR----PLSCEYKMENVTRMVVCDL--GNPMVTGTNFSLGLRFAVPR 747

  Fly   725 LRGRSLEIQAEV-LSARDESNPENNKLTNVLSLREKADIYVSGVQTNDHVVL-------KESPYT 781
            |...::.|..:: :.:.::.||::|.....:::...|.:.:.||.....:||       ::.|:.
Mouse   748 LEKTNMSINFDLQIRSSNKDNPDSNFERVQINITAIAQVEIRGVSHPPQIVLPIHNWEPEKKPHK 812

  Fly   782 AE-----VVNYYEIKSHGPSTLENLTVSLYIPVAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPIN 841
            .|     |.:.||:.:.||||:.:..:.:..|.:.:......:.|:.|..| :|.:...:|.|  
Mouse   813 EEEVGPLVEHIYELHNIGPSTISDSILDVGWPFSARDEFLLYIFHLQTLGP-LQCQTNPEINP-- 874

  Fly   842 FIDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVEQNPSISLL--NEDLPV------NNT 898
                              ..:..:|:|  |:...||..: :|.:|..|  ..|:||      :..
Mouse   875 ------------------QDIKPAASP--EDTPELSAFL-RNATIPHLVRKRDVPVVQLHRQSPA 918

  Fly   899 LVLNCQDTNVTLCVPVEI---RLENGLQLKPEELMNMTVSFTVNLKDADDIWEYFVIQTDLKVHK 960
            .:|||  ||:. |:.:..   ||..|     |..:         ||....:|.:..:: ::.|.:
Mouse   919 RILNC--TNID-CLQISCAVGRLGGG-----ESAV---------LKVRSRLWAHTFLK-EISVEE 965

  Fly   961 IGD----------------PTLSSFTIEK---------------KIESNVICKHAEIA----IWK 990
            ...                .:|.||.::|               .::::||.....::    :|.
Mouse   966 TSQEQLVKTLKRKNDHYALASLVSFEVKKMPYKEQPAKLPAGSTAVKTSVIWATPNVSFSIPLWV 1030

  Fly   991 IIVSVIVGILVFSAATYALYKRGFFKRA-----IKDDLKQLIRD 1029
            ||:::::|:||.:..|.||:|.|||.||     ...|.:||..|
Mouse  1031 IILAILLGLLVLAILTLALWKCGFFDRARPPQDEMTDREQLTSD 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 25/76 (33%)
Int_alpha 384..434 CDD:214549 26/52 (50%)
Int_alpha 447..>492 CDD:214549 19/48 (40%)
Integrin_alpha2 486..808 CDD:462478 91/382 (24%)
Itga8NP_001395029.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 41..104 23/71 (32%)
Int_alpha 53..111 CDD:214549 21/60 (35%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 121..182 13/69 (19%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 187..239 14/64 (22%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 252..305 18/61 (30%)
FG-GAP 267..300 CDD:460357 13/36 (36%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 306..371 19/64 (30%)
Int_alpha 316..>364 CDD:214549 17/47 (36%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 372..430 25/57 (44%)
Int_alpha 382..436 CDD:214549 28/53 (53%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 434..497 22/68 (32%)
Int_alpha 447..491 CDD:214549 17/43 (40%)
Cell attachment site. /evidence=ECO:0000255 454..456 0/1 (0%)
Integrin_alpha2 483..933 CDD:462478 115/499 (23%)
Integrin_alpha 1051..1065 CDD:459778 6/13 (46%)

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