DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ItgaPS4 and Itgax

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_067309.1 Gene:Itgax / 16411 MGIID:96609 Length:1169 Species:Mus musculus


Alignment Length:1334 Identity:275/1334 - (20%)
Similarity:446/1334 - (33%) Gaps:481/1334 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FCLLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIREKS-IMVAAPRANSSL 65
            |.||:..:..|...::|..::.:        .::|    :.||.|::..:.| ::|.||:   .:
Mouse     8 FLLLLGFVSCLGFNLDAEKLTHF--------HMDG----AEFGHSVLQYDSSWVVVGAPK---EI 57

  Fly    66 EAQRNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPND------GLLTAKNKDFRWLGGAMDG 124
            :|...|   |.:::|.:.:| ||.|.::.       :|.:      ||..|...:..||      
Mouse    58 KATNQI---GGLYKCGYHTG-NCEPISLQ-------VPPEAVNISLGLSLAAATNPSWL------ 105

  Fly   125 GTRDSDKFLVCAPRFYSINNENDYNNGMCYWLS--------------DTPK-------------N 162
                    |.|.|..:....||.|..|:|:.||              :.||             :
Mouse   106 --------LACGPTVHHTCRENIYLTGLCFLLSSSFKQSQNFPTAQQECPKQDQDIVFLIDGSGS 162

  Fly   163 IDSTE----------VMEKW------------------------------PLRI----------- 176
            |.||:          ||.:.                              ||.:           
Mouse   163 ISSTDFEKMLDFVKAVMSQLQRPSTRFSLMQFSDYFRVHFTFNNFISTSSPLSLLGSVRQLRGYT 227

  Fly   177 ---------------------------------EKKQ--------VLKLADTNLIPYYSMG---- 196
                                             .:||        |:.:|:...|..|::|    
Mouse   228 YTASAIKHVITELFTTQSGARQDATKVLIVITDGRKQGDNLSYDSVIPMAEAASIIRYAIGVGKA 292

  Fly   197 --------------------------------------------------------EL-----GL 200
                                                                    ||     |.
Mouse   293 FYNEHSKQELKAIASMPSHEYVFSVENFDALKDIENQLKEKIFAIEGTETPSSSTFELEMSQEGF 357

  Fly   201 SAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQEE 265
            ||..:.|..  ::||.|...|.|...|   .||              |.:....|...:|....:
Mouse   358 SAVFTPDGP--VLGAVGSFSWSGGAFL---YPS--------------NMRPTFINMSQENEDMRD 403

  Fly   266 FSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIFDIYEDSIYKYHEFRGNHFGEYFGYS 330
             :|.||:.:..::...: |.:|   .||| :...|:..||...........|.||...|.|||.|
Mouse   404 -AYLGYSTALAFWKGVH-SLIL---GAPR-HQHTGKVVIFTQESRHWRPKSEVRGTQIGSYFGAS 462

  Fly   331 VLAEDLNGDGKTD-VIISAPLYALRNSYDDGAIYVFINKGSFTFEERIIRSPAG-SGGRFGTTLS 393
            :.:.|::.||.|| |:|..|.|.........::......||.......:....| ..||||..|:
Mouse   463 LCSVDMDRDGSTDLVLIGVPHYYEHTRGGQVSVCPMPGVGSRWHCGTTLHGEQGHPWGRFGAALT 527

  Fly   394 RIGDINKDGYNDVAVGAP--FAGNGSVFIYLG-SENGLRDPPSQCLDAPSQQPSKYGSYMFGHGL 455
            .:||:|.|...|||:|||  ....|:|:|:.| |...:...|||.:.| ||.||:.  ..||..|
Mouse   528 VLGDVNGDSLADVAIGAPGEEENRGAVYIFHGASRQDIAPSPSQRISA-SQIPSRI--QYFGQSL 589

  Fly   456 SRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHAII--KPK---------LQNVNPEEERVN 509
            |.|.|:..:|..|.|:|:..  .|.|.|..|::::...:  .|.         .:.|.||:...:
Mouse   590 SGGQDLTRDGLVDLAVGSKG--RVLLLRTRPILRVSPTVHFTPAEISRSVFECQEQVAPEQTLSD 652

  Fly   510 ITVCYRLSSKSDSKAKALMEQELVIRID--IDTKSKIKLAVFDE---------------EHGSQM 557
            .|||..:   .:|....|.:....:..|  :|.......|:|.|               :|...:
Mouse   653 ATVCLHI---HESPKTQLGDLRSTVTFDLALDHGRLSTRAIFKETKTRALTRVKTLGLNKHCESV 714

  Fly   558 SFKAKAFHEEICSEFQIEMDKRAKFTPIALEMQYELSKKIPNSGDFCEDCAVVDPAEPKFVTEYI 622
            .....|     |.|..:        |||.|.:.:.|.....:|....:....||  :..:.|..:
Mouse   715 KLLLPA-----CVEDSV--------TPITLRLNFSLVGVPISSLQNLQPMLAVD--DQTYFTASL 764

  Fly   623 TFNTGCATD-VCVADLKISC-INASSTLVLGTTAVLRLTYNITNNGEFAYHPKFSVTNSAGLSLA 685
            .|...|..| :|..||.:.. .....|||:|:...|.:...::|:||.:|....::....|||..
Mouse   765 PFEKNCGADHICQDDLSVVFGFPDLKTLVVGSDLELNVDVTVSNDGEDSYGTTVTLFYPVGLSFR 829

  Fly   686 QVPGNCKVNEAVMVCDLNHGQRMAKGDTDSLTISFDVRQLRGR-SLEIQAEVLSARDESNPENNK 749
            :|.               .||...:...|...      |.||: ||.:..       :|.|:.::
Mouse   830 RVA---------------EGQVFLRKKEDQQW------QRRGQHSLHLMC-------DSTPDRSQ 866

  Fly   750 LTNVLSLREKADIYVSGVQTNDHVVLKESPYTAEVVNYYEIK------SHGPSTLENLTVSLYIP 808
            .....|...:..|:..|.|....|....|| .||:.:...::      ::.|.| ...|..|.:|
Mouse   867 GLWSTSCSSRHVIFRGGSQMTFLVTFDVSP-KAELGDRLLLRARVGSENNVPGT-PKTTFQLELP 929

  Fly   809 VAYKTPDSTNVKHIVTSSPKIQSKYAHKIMPINFIDQNNALANNFAIDHDQST--LLFSATPQHE 871
            |.|..       :.:.||                              |||.|  |.||.:.:.:
Mouse   930 VKYAV-------YTMISS------------------------------HDQFTKYLNFSTSEKEK 957

  Fly   872 NVGNLSGIVEQNPSISLLNE-DLPVNNTLVLNCQDTNVTLCVPVEIRLE-----------NGL-- 922
                 :.:||....::.|.: |:||           ::...||:|::.|           |.|  
Mouse   958 -----TSVVEHRFQVNNLGQRDVPV-----------SINFWVPIELKGEAVWTVMVSHPQNPLTQ 1006

  Fly   923 ----QLKPEE---LMNMTVSFTVNLKDAD------DIWE-------YFVIQTDLKVHKIGDPTLS 967
                :|||.:   |.:|..|..::...||      ||..       ||:::.:|....|      
Mouse  1007 CYRNRLKPTQFDLLTHMQKSPVLDCSIADCLHLRCDIPSLGILDELYFILKGNLSFGWI------ 1065

  Fly   968 SFTIEKKIESNVICKHAEIA-------------------------IWK-------IIVSVIVGIL 1000
            |.|::||:   ::...|||.                         ::|       |:.|.:.|:|
Mouse  1066 SQTLQKKV---LLLSEAEITFNTSVYSQLPGQEAFLRAQTKTVLEMYKVHNPVPLIVGSSVGGLL 1127

  Fly  1001 VFSAATYALYKRGFFKRAIKDDLKQLIRDSFEDG 1034
            :.:..|..|||.|||||..|:.|::.......||
Mouse  1128 LLAIITAILYKAGFFKRQYKEMLEEANGQFVSDG 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 23/74 (31%)
Int_alpha 384..434 CDD:214549 21/52 (40%)
Int_alpha 447..>492 CDD:214549 14/44 (32%)
Integrin_alpha2 486..808 CDD:462478 70/358 (20%)
ItgaxNP_067309.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 23..78 16/73 (22%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 79..138 16/79 (20%)
vWA_integrins_alpha_subunit 151..326 CDD:238746 14/174 (8%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 341..392 15/69 (22%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 393..444 13/56 (23%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 445..505 19/59 (32%)
Int_alpha 455..505 CDD:214549 16/49 (33%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 508..566 21/57 (37%)
Int_alpha 518..573 CDD:214549 23/54 (43%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 571..631 20/64 (31%)
Integrin_alpha2 617..1041 CDD:462478 102/524 (19%)
Integrin_alpha 1138..1152 CDD:459778 8/13 (62%)
GFFKR motif 1140..1144 3/3 (100%)

Return to query results.
Submit another query.