DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and Itga3

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001293091.1 Gene:Itga3 / 16400 MGIID:96602 Length:1068 Species:Mus musculus


Alignment Length:1109 Identity:256/1109 - (23%)
Similarity:433/1109 - (39%) Gaps:269/1109 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SYFGFSLVIREKS-------IMVAAPRANSSLEAQRNISEPGVIFRCYFES-GNNCSPYNIDTKG 97
            |.||:|:.:..::       ::..|||..:..:...|  ..|.::.|...: .::|...:|..|.
Mouse    50 SLFGYSVALHRQTERQQRYLLLAGAPRDLAVGDDYTN--RTGAVYLCPLTAHKDDCERMDISEKS 112

  Fly    98 NYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDKFLVCAPRF------------------YSINN 144
            :    |:..::     :..|||..: .....:.:.||||.|:                  |...|
Mouse   113 D----PDHHII-----EDMWLGVTV-ASQGPAGRVLVCAHRYTKVLWSGLEDQRRMVGKCYVRGN 167

  Fly   145 E---------NDYNNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPYYSMGELGL 200
            :         ..|:|.||.         .:|:.::.                      .|.:||.
Mouse   168 DLQLDPGDDWQTYHNEMCN---------SNTDYLQT----------------------GMCQLGT 201

  Fly   201 SAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKNFGQEE 265
            |...:.:.  :..||||...|||:.::            .||:..:.:......:.|..|.    
Mouse   202 SGGFTQNT--VYFGAPGAYNWKGNSYM------------IQRKDWDLSEYSYRGSEEQGNL---- 248

  Fly   266 FSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIF------DIYEDSIYKYHEFRGNHFG 324
              |.||.|..|.........:..|..||| :...|..::.      |:....:.|     |...|
Mouse   249 --YIGYTVQVGNAILHPTDIITVVTGAPR-HQHMGAVFLLKQESGGDLQRKQVLK-----GTQVG 305

  Fly   325 EYFGYSVLAEDLNGDGKTDVIISAPLYALRNSYDDGAIYVFINKGSFTFEER---IIRSPAGSGG 386
            .|||.::...|||.||..|:::.||.|..|.....||:|||:|:...:|.::   ::..|:.|. 
Mouse   306 AYFGSAIALADLNNDGWQDLLVGAPYYFERKEEVGGAVYVFMNQAGASFPDQPSLLLHGPSRSA- 369

  Fly   387 RFGTTLSRIGDINKDGYNDVAVGAPFAGNGSVFIYLGSENGLRDPPSQCLDAPSQQPSKYGSYMF 451
             ||.:::.|||||:||:.|:||||||.|.|.|:||..|..||...|.|.:.  .::....|...|
Mouse   370 -FGISIASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSGGLLRQPQQIIH--GEKLGLPGLATF 431

  Fly   452 GHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKI-H-------AIIKPKL---------- 498
            |:.||...|:|.|.:.|..:|: .::.:.|.||.||:.| |       |::.|.|          
Mouse   432 GYSLSGKMDVDENLYPDLLVGS-LSDHIVLLRARPVINILHRTLVARPAVLDPALCTATSCVQVE 495

  Fly   499 ------QNVNPEEERVNITVCYRLSSKSDSKAKALMEQELVIRIDIDTKSKIKLAVFDEEHGSQM 557
                  |:......|.|||:.|.|.:..|.:...|            ..::.:.:||   ||   
Mouse   496 LCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRL------------RFARSQSSVF---HG--- 542

  Fly   558 SFKAKAFHEEICSEFQ-IEMDK-RAKFTPIALEMQYELSKKIPNSGDF----CEDCAVVDPAEPK 616
            .|.....|   |...: :.||. |.|..||.:.|.|.|..::|:....    .:...|::.|:..
Mouse   543 FFSMPETH---CQTLELLLMDNVRDKLRPIVIAMNYSLPLRMPDRLKLGLRSLDAYPVLNQAQAM 604

  Fly   617 FVTEYITFNTGCATD-VCVADLKISCINASSTL-------VLGTTAVLRLTYNITNN------GE 667
            .....:.|...|..| .|.::|::.....|..|       ....|..|.|:.|:||:      ||
Mouse   605 ENHTEVHFQKECGPDNKCDSNLQMRAAFLSEQLQPLSRLQYSRDTKKLFLSINVTNSPSSQRAGE 669

  Fly   668 FAYHPKFSVTNSAGLSLAQV--PGNCKVNEAVMVCDLNH----GQRMAKGDTDSLTISFDV--RQ 724
            .|:....::...:.|.|:.|  .|.|:.|...::|:|.:    .|||      .|.|:|:|  ..
Mouse   670 DAHEALLTLEVPSALLLSSVRPSGTCQANNETILCELGNPFKRNQRM------ELLIAFEVIGVT 728

  Fly   725 LRGRSLEIQAEVLSARDESNPENNKLT---------NVLSLREKADIYVSGVQTNDHVVLKESPY 780
            |..|.|.:..::.::..:.|.:...||         ::..:..:...:..|.     |:.:.:..
Mouse   729 LHTRDLPVLLQLSTSSHQDNLQPVLLTLQVDYTLQASLSLMNHRLQSFFGGT-----VMGEAAMK 788

  Fly   781 TAEVVN---YYEIK----SHGPSTLENLTVSLYIPVAYKTPDSTNVKHIV-TSSPKIQSKYAHKI 837
            |||.|.   .||.:    ..|.:.|..|.:.|..|.     :.||.|.:: .:...|.|..:...
Mouse   789 TAEDVGSPLKYEFQVSPVGDGLAALGTLVLGLEWPY-----EVTNGKWLLYPTEITIHSNGSWPC 848

  Fly   838 MPINFIDQNNALAN--NFAIDHDQSTLLFSATPQHENVGNLSGIVEQNPSISLLNEDLPVNNTLV 900
            .|      :..|.|  |..:.....|.|   :||........|..:.:|.::|.......:.| |
Mouse   849 QP------SGNLVNPLNLTLSDPGVTPL---SPQRRRRQLDPGGDQSSPPVTLAAAKKAKSET-V 903

  Fly   901 LNCQDTNVTLCVPVEIRLENGLQLKPEELMNMTV-------SFTVNLKDAD----DIWEYFVIQT 954
            |.|.:.... ||.:|..|.:     ...:.|:||       :|..:.||.|    |.|....::|
Mouse   904 LTCSNGRAR-CVWLECPLPD-----TSNITNVTVKARVWNSTFIEDYKDFDRVRVDGWATLFLRT 962

  Fly   955 DLKVHKIGDPTLSS------FTIEKKIESNVICK-HAEIAIWKIIVSVIVGILVFSAATYALYKR 1012
            .:       ||::.      |:::  |:|.::.: .|||.:|.::|:|..|:|:.......|:|.
Mouse   963 SI-------PTINMENKTTWFSVD--IDSELVEELPAEIELWLVLVAVGAGLLLLGLIILLLWKC 1018

  Fly  1013 GFFK 1016
            .|||
Mouse  1019 DFFK 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 29/75 (39%)
Int_alpha 384..434 CDD:214549 26/49 (53%)
Int_alpha 447..>492 CDD:214549 17/52 (33%)
Integrin_alpha2 486..808 CDD:462478 84/389 (22%)
Itga3NP_001293091.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 38..103 10/54 (19%)
Int_alpha 48..108 CDD:214549 11/59 (19%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..171 12/70 (17%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..235 15/94 (16%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 236..293 12/63 (19%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 294..355 22/65 (34%)
Int_alpha 305..353 CDD:214549 20/47 (43%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 357..412 26/56 (46%)
Int_alpha 368..418 CDD:214549 27/51 (53%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 416..478 18/64 (28%)
Integrin_alpha2 464..918 CDD:462478 107/501 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 865..890 6/27 (22%)

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