DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and if

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:XP_061518066.1 Gene:if / 1272247 VectorBaseID:AGAMI1_012318 Length:1538 Species:Anopheles gambiae


Alignment Length:994 Identity:260/994 - (26%)
Similarity:415/994 - (41%) Gaps:179/994 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVI-REKS---IMVAAPRANSSLEA 67
            ::|:.|.....|:|:     ..:||...||: .||.||||:.: ||::   ::|.||.||:|   
Mosquito    30 LLLVWLGQTATAFNL-----DTINFILKEGD-PSSMFGFSVALHREQNNSWVIVGAPTANTS--- 85

  Fly    68 QRNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRDSDKF 132
            |..:.:.|.::||.......|.....|||||.....|:.:.|..|   :|.|..:.....|. ..
Mosquito    86 QPGVIKGGAVYRCDIYDDYRCYLLPFDTKGNTYNDQNEQIDTKSN---QWFGATVASAGIDG-PL 146

  Fly   133 LVCAPR--FYSI---NNENDYNNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPY 192
            :.||||  |:.:   ..|.....|.||...:..:|.:...     |.|           |....|
Mosquito   147 VACAPRYVFHQLQPRKAERVEPVGTCYLAKNNMQNFEDIS-----PCR-----------TAYWGY 195

  Fly   193 YSMG--ELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKT--------------SSGRQ 241
            :..|  :.|.||.:::|.|:|.:||||...|:|.::      ||.|              ..|.|
Mosquito   196 HRQGSCQAGFSAAITNDGSRLFIGAPGSYYWQGQMY------SINTDVVFPYKPPRYGHFGEGGQ 254

  Fly   242 RRGMNTNRKCNECNPEPKNF------GQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFG 300
            ....:.|      ||:.|.:      .:|:.||.||:.::|.|:......|  ....|||....|
Mosquito   255 IYSFSLN------NPKDKVYKTLEDTKKEDDSYLGYSSTTGDFNGDGTQGV--AVGKPRGARLLG 311

  Fly   301 EAYIFDIYEDSIYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALRNS---YDDGAI 362
            :..   ||..::.......|...|.|||||:.|.|::||...|:||.||:|...|:   |:.|.:
Mosquito   312 KVL---IYSWNMTNQQNITGEQIGAYFGYSLAAVDVDGDKLDDLIIGAPMYTEPNNEGKYETGRV 373

  Fly   363 YVFINKGSF--TFEERIIRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAPF---AGNGSVFIYL 422
            |:.....:.  .|.|...|....|..|||..:..:.|:|.|||.|.|||||:   .|.|:|:|:.
Mosquito   374 YIMYQGAAADGRFRELDTRDGVNSKARFGLAVCSLADLNLDGYGDFAVGAPYDGPNGRGAVYIFY 438

  Fly   423 GSENGLRDPPSQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPV 487
            ||..|.....||.:.|.........| .||..||.|.|:|||.:.|..:||..::...:::|.||
Mosquito   439 GSRTGPLAKASQVIQAEDMAGVTRLS-TFGFSLSGGIDLDGNQYPDMVVGAYESDKALVFKARPV 502

  Fly   488 VKIHA--IIKPK-----LQNVNPEEERVNITV-CYRLSS---KSDSKAKALMEQELVIRIDIDTK 541
            ..:.|  :.:||     |...|...:|.|.|| |..::|   .:......:::.|:...:|....
Mosquito   503 AAMVASTLFEPKSKLIALDVKNCALKRTNKTVPCTVVNSCLKYNGINVPPMLDIEISWTLDARKA 567

  Fly   542 SKIKLAVFDEEHG---SQMSFKAKAFHEEICSEFQIEMDKRAKFTPIALEMQYELSKKI------ 597
            ...::...|.|..   :|:...|:...|.|..:..:..:.|.|.||:.:||.|.|.:.:      
Mosquito   568 RNPRMFFLDHEGNHTRTQLMRLARGKLECIEDKVYVADNIRDKITPLEVEMAYGLRQNVLGRQRR 632

  Fly   598 PNSGDFCEDCAVVDPAEPKFVTEYITFNTGCATD-VCVADLKISCINASSTLVLGTTAVLRLTYN 661
            |.:    ....|:|........:.|.....|..| |||.||::. :.:....:||:..:|.:...
Mosquito   633 PRA----HTEPVLDQNRGTVQRDAINIQKNCGPDNVCVPDLRME-VKSVDDYLLGSNNLLSVEVL 692

  Fly   662 ITNNGEFAYHPKFSVTNSAGL---------SLAQVPGNCKVNEA----VMVCDLNHGQRMAKGDT 713
            |||.||.|:...|.:....||         .:..||..|....|    .:.||:  |..::.|..
Mosquito   693 ITNRGEDAFEAGFYMAVPNGLDFRRVDRLGEVKDVPVLCTAPSAATNKTLKCDI--GNPLSSGKV 755

  Fly   714 DSLTI----SFDVRQLRGRSLEIQAEVLSARDE--SNPENNKLTNVLSLREKADIYVSGVQTNDH 772
            ....:    ||....  |.|.:...|..|...|  .|.::|.:...:.:..:.|:.:|||...|.
Mosquito   756 VHFKVILAPSFSAGM--GSSYDFYLETNSTNAELDGNRQDNVMRKTIGILVQTDLAMSGVSLPDQ 818

  Fly   773 VVLKESPYTA------------EVVNYYEIKSHGPSTLENLTVSLYIPVAYKTPDSTNVKHIVTS 825
            .....|.|.:            :||:.|||::.||||::.  ...::...|:|.|...:.::: :
Mosquito   819 FHYNHSEYKSLAEAKTERDIGPQVVHIYEIRNEGPSTIDE--AEFFVLWPYETVDGVPLMYLL-N 880

  Fly   826 SPK-------IQSKYAHKIMPINF-IDQNNALANNFAID--------HDQS---TLLFSATPQHE 871
            .|:       :.::||:   |:|. ||  :|||....:|        :..|   |..|::.....
Mosquito   881 QPETHGNIECLPTEYAN---PLNLAID--SALARKSFLDKVGVSSASYSSSMGRTAKFNSAAGSG 940

  Fly   872 NVGNLSGIVEQNPSISLLN 890
            .||     .|...|||.|:
Mosquito   941 TVG-----AEGASSISFLS 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 26/77 (34%)
Int_alpha 384..434 CDD:214549 22/52 (42%)
Int_alpha 447..>492 CDD:214549 16/44 (36%)
Integrin_alpha2 486..808 CDD:462478 85/373 (23%)
ifXP_061518066.1 None

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