DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and Itga1

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_001028400.2 Gene:Itga1 / 109700 MGIID:96599 Length:1179 Species:Mus musculus


Alignment Length:1060 Identity:242/1060 - (22%)
Similarity:416/1060 - (39%) Gaps:247/1060 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 IDTKGNYKGMPNDGLLTAKNKDFRWLGGA-----------MDGGTRDS-----------DKFLVC 135
            |..:|..:.|...|:.||:.:.|....||           .||.:.|:           |:.:  
Mouse   240 IGRRGGLQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENI-- 302

  Fly   136 APRFYSINNENDYNNGMCYWLSDTPKNID-----STEVMEKWPLRIEKKQVL------------- 182
              :.:||.....||.|..    .|.|.::     ::|..||....:..:..|             
Mouse   303 --QRFSIAILGHYNRGNL----STEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALGERIFA 361

  Fly   183 --KLADTNLIPY-YSMGELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQE----VPSIKTSSGR 240
              ..||.:...: ..|.:.|.|||.|.|  .:::||.|...|.|:|.:::.    :|.       
Mouse   362 LEATADQSAASFEMEMSQTGFSAHYSQD--WVMLGAVGAYDWNGTVVMQKANQIVIPH------- 417

  Fly   241 QRRGMNTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIF 305
                 ||.     ...||....:...||.||.|:|......    |||:|..||.|:. |:..|:
Mouse   418 -----NTT-----FQTEPTKMNEPLASYLGYTVNSATIPGD----VLYIAGQPRYNHT-GQVVIY 467

  Fly   306 DIYEDSIYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTD-VIISAPLYALRNSYDDGAIYVF-INK 368
            .:.:..:.......|...|.|||..:...|::.|..|| :::.||:|......:.|.:||: :|:
Mouse   468 KMEDGDVNILQTLSGEQIGSYFGSVLTTIDIDKDSYTDLLLVGAPMYMGTEKEEQGKVYVYAVNQ 532

  Fly   369 GSFTFE---ERIIRSPAGS---------------GGRFGTTLSRIGDINKDGYNDVAVGAPFAGN 415
            ..|.::   |.|.::...|               |.||||.::.:.|:|.||:|||.:|||...:
Mouse   533 TRFEYQMSLEPIKQTCCSSLKDNSCTKENKNEPCGARFGTAVAAVKDLNVDGFNDVVIGAPLEDD 597

  Fly   416 --GSVFIYLGSENGLRDPPSQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEA 478
              |:|:||.||...:|...:|.:  ||....|...: ||..:....|::|:|..|..||.....|
Mouse   598 HAGAVYIYHGSGKTIRKEYAQRI--PSGGDGKTLKF-FGQSIHGEMDLNGDGLTDVTIGGLGGAA 659

  Fly   479 VYLYRAYPVVKIHAIIKPKLQNVNPEEERV--------NITVCY--RLSSKSDSKAKALMEQELV 533
            ::..|...|||:....:|...|:..:..||        |.|:|:  :|.||.||    :.|.:|.
Mouse   660 LFWARDVAVVKVTMNFEPNKVNIQKKNCRVEGKETVCINATMCFHVKLKSKEDS----VYEADLQ 720

  Fly   534 IRIDIDTKSKIKLAVFD--EEHGSQMSFKAKAFHEEICSEFQIEM-DKRAKFTPIALEMQYELSK 595
            .|:.:|:..:|..:.|.  :|...|.:...:   |..|......| ||......:.:.:.:.|:.
Mouse   721 YRVTLDSLRQISRSFFSGTQERRIQRNLTVR---ESECIRHSFYMLDKHDFQDSVRVTLDFNLTD 782

  Fly   596 KIPNSGDFCEDCAVVDPAEPKFVTEYITFNTGCAT-DVCVAD--LKISCINASSTLVLGTTAVLR 657
              |.:|      .|:|.|.|..|..:|.|...|.. :.||:|  |.:|....:..:|........
Mouse   783 --PENG------PVLDDALPNSVHGHIPFAKDCGNKERCVSDLTLDVSTTEKNLLIVRSQNDKFN 839

  Fly   658 LTYNITNNGEFAYHPKFSVTNSAGLSLAQV----PGNCKVNEAVMVCDLNHGQRMAKGDTDSLTI 718
            ::..:.|.|:.||:.:..|..|..|..:.:    ..:|:.|:.: .|.:.: ..:..||..:..|
Mouse   840 VSLTVKNKGDSAYNTRTVVQYSPNLIFSGIEEIQKDSCESNQNI-TCRVGY-PFLRTGDVVNFKI 902

  Fly   719 SFDVRQLRGRSLEIQAEV-LSARDESNPE-----NNKLTNVLSLREKADIYVSGVQTNDHVVLKE 777
            .|   |.....|...|.: |||..:|...     :|::...:.::.:..:......:..|:.:..
Mouse   903 IF---QFNTSHLSENAIIHLSATSDSEEPLESLYDNEVNISIPVKYEVGLQFYSSASEHHISVAA 964

  Fly   778 SPYTAEVVN-----------YYEIKSHG----PS-----TLENLTVSLYIPVAYKT----PDSTN 818
            :....|::|           :|.|:..|    |.     :..|||...| ||.|.|    .|:.|
Mouse   965 NETVPELINSTKDIGDEINVFYTIRKRGHFPMPELRLAISFPNLTSDGY-PVLYPTGWSSSDNVN 1028

  Fly   819 VKHIVTSSP-KIQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVEQ 882
            .:......| .|.|   .|.|.|:                 :|.:|...|.|..:...::.|   
Mouse  1029 CRPRSLEDPLGINS---GKKMTIS-----------------KSEVLKRGTIQDCSTCKIATI--- 1070

  Fly   883 NPSISLLNEDL-PVNNTLVL------NCQDTNVTLCVPVEIRLENGLQLKPEELMNMTVSFTVNL 940
              :..||..|: .||.:|:|      ....:::.|.:..|::.||.         ::|:| :.|.
Mouse  1071 --TCHLLPSDVSQVNVSLILWKPTFIKAHFSSLNLTIRGELQSENS---------SLTLS-SSNR 1123

  Fly   941 KDADDIWEYFVIQTDLKVHKIGDPTLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGILVFSAA 1005
            |.          :..:::.|.|.|                   ..:.:|.|::|...|:|:....
Mouse  1124 KR----------ELAIQISKDGLP-------------------GRVPLWVILLSAFAGLLLLMLL 1159

  Fly  1006 TYALYKRGFFKRAIKDDLKQ 1025
            ..||:|.|||||.:|..:::
Mouse  1160 ILALWKIGFFKRPLKKKMEK 1179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 27/92 (29%)
Int_alpha 384..434 CDD:214549 23/66 (35%)
Int_alpha 447..>492 CDD:214549 13/44 (30%)
Integrin_alpha2 486..808 CDD:462478 78/367 (21%)
Itga1NP_001028400.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 30..91
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 101..160
vWA_integrins_alpha_subunit 171..351 CDD:238746 24/118 (20%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 365..417 15/53 (28%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 422..474 17/56 (30%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 475..537 17/61 (28%)
Int_alpha 485..>528 CDD:214549 13/42 (31%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 556..614 21/57 (37%)
Int_alpha 567..620 CDD:214549 23/52 (44%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 618..678 17/62 (27%)
Integrin_alpha2 664..1044 CDD:462478 88/403 (22%)
GFFKR motif 1167..1171 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.

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