DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and Itga9

DIOPT Version :10

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_598482.2 Gene:Itga9 / 104099 MGIID:104756 Length:1036 Species:Mus musculus


Alignment Length:1138 Identity:283/1138 - (24%)
Similarity:487/1138 - (42%) Gaps:234/1138 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLV----IREKSIMVAAPRANSSL 65
            |::.|:|......|||:.  ....:.|....|    |:||::::    ...:.::|.||:|:|..
Mouse    17 LLLALVAAGVPAGAYNLD--AQRPVRFQGPSG----SFFGYAVLEHFHDNTRWVLVGAPKADSKY 75

  Fly    66 EAQRNISEPGVIFRC--YFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRD 128
            ..  ::..||.:|:|  :......|:..:: .:|..:|.| .|.....::|..|:|.::....|.
Mouse    76 ST--SVKSPGAVFKCRVHTNPDRRCTELDM-ARGRTRGAP-CGKTCRGDRDDEWMGVSLARQPRA 136

  Fly   129 SDKFLVCAPRFYSINNENDY--NNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIP 191
            ..:.|.||.|:.:|..|.|:  .:|.||.:   |.|:.:            |.:|       |||
Mouse   137 DGRVLACAHRWKNIYYEADHILPHGFCYLI---PSNLQA------------KGKV-------LIP 179

  Fly   192 YY-----SMGE------LGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGM 245
            .|     ..||      .|::...:::  .::|||||...|.|::.:.....             
Mouse   180 CYEEYKKKYGEEHGSCQAGIAGFFTEE--LVVMGAPGSFYWAGTLKVLNLTD------------- 229

  Fly   246 NTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIF--DIY 308
            ||..|.|:     :......::|.||||::|:|...:::.|  |..||: :...|:.|||  |..
Mouse   230 NTYFKLND-----EAIMNRRYTYLGYAVTAGHFSHPSITDV--VGGAPQ-DEGIGKVYIFRADRR 286

  Fly   309 EDSIYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYA-LRNSYDDGAIYVFINKGSFT 372
            ..::.|..:..|...|.|||.|:.|.|||.||.:|:::.||::: :|   |:|.:.|::|:|...
Mouse   287 SGTLIKIFQASGKKMGSYFGSSLCAVDLNMDGLSDLLVGAPMFSEIR---DEGQVTVYLNQGHGA 348

  Fly   373 FEERI-IRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAP----FAGNGSVFIYLGSENGLRDPP 432
            .||:: :...|.....||.:::.:|||:.||:.|||||||    ||  |:|:||.|..||:....
Mouse   349 LEEQLTLTGDAAYNAHFGESIANLGDIDDDGFPDVAVGAPKEEDFA--GAVYIYHGDANGIVPKY 411

  Fly   433 SQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHA----- 492
            |..|......|:   ..|||..:|.|.|:||||:.|..|||..:::|.|.||.||:.:..     
Mouse   412 SMKLSGRRLNPT---LRMFGQSISGGIDMDGNGYPDVTIGAFLSDSVVLLRARPVITVDVSIFLP 473

  Fly   493 ----IIKPKLQNVNPEEERVNITVCYRLSSKSDSKAKALMEQELVIRIDIDTKSK-----IKLAV 548
                |..|:..:.......:|:|||:|...|:......|   ...:..|:..|.|     :...:
Mouse   474 GSINITAPQCHDGQQPVNCLNVTVCFRFHGKNVPGEIGL---NYNLTADVAQKEKGQLPRVYFVL 535

  Fly   549 FDEEHGSQMSFKAKAFH-EEICSEFQIEMDKRAK--FTPIALEMQYELSKKIPNSGDFCEDCAVV 610
            |.|..| |:|.:.:..| :|:|..:...:.:|.:  .:||..|..|.|.:.:...    ||..:.
Mouse   536 FGETAG-QVSERLQLSHMDEVCHHYVAHVKRRVQDVISPIVFEAAYSLDEHVMGE----EDRELP 595

  Fly   611 DPAEPKFVTEYI--------------TFNTGCATDVCVADLKI-------SCINASSTLVLGTTA 654
            |      :|..:              .|...|.::.|.|||::       |....:..|.||...
Mouse   596 D------LTPVLRWKKGQRISQKNQTVFERNCQSEDCAADLQLRGKLLLSSVDEKTPHLALGAVK 654

  Fly   655 VLRLTYNITNNGEFAYHPKFSVTNSAGL------SLAQVPGNCKVNEA-VMVCDLNHGQRMAKGD 712
            .:.|..:|:|.|:.||....|...|..|      ...::..:|::.|: .:.|.:......:|..
Mouse   655 NISLNISISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLESDFLKCSVGFPFMRSKSK 719

  Fly   713 TDSLTISFDVRQLRGRSLEIQAEVLSARDESNPE------NNKLTNVLSLREKADIYVSGVQTND 771
            .: .::.||...|.|.. ||.:.:::|: ..|.|      :|.||..:.|..:.|..::|:.:..
Mouse   720 YE-FSVIFDTSHLSGEE-EILSFIVTAQ-SGNLERSEALHDNTLTLTVPLVHEVDTSITGIVSPT 781

  Fly   772 HVVLKESPYTAEVVNYYEIKSH-------------GPSTLENLTVSLYIPVAYKTP---DSTNVK 820
            ..|..||...:..:...:.:.|             |||||...:||:..| :..:|   :...|:
Mouse   782 SFVYGESVDASNFIQLDDQECHFQPVNITLQVYNMGPSTLPGSSVSISFP-SRLSPGGAEMFQVQ 845

  Fly   821 HIVTSSPK----IQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVE 881
            .:|.|..|    :|......|:|   .:|.|.....||        .||.:.:            
Mouse   846 DMVVSQEKGNCSLQRNPTPCIIP---QEQENIFHTIFA--------FFSKSGR------------ 887

  Fly   882 QNPSISLLNEDLPVNNTLVLNCQDTNVTLCVPVEIRLENGLQLKPEELMNMTVSFTVNLKDADDI 946
                 .:|:.:.|.:..|.|:|   |::.....|.|..|...|...|::.         ||:..:
Mouse   888 -----KVLDCEKPGSFCLTLHC---NLSALPKEESRTINLYMLLNTEILK---------KDSSSV 935

  Fly   947 WEYFV-----IQTDLKVHKI--GDP--TLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGILVF 1002
            .::..     ::..|:|.:|  |:|  ||..|.....:|     ....:..|.|.:|::||||:|
Mouse   936 IQFMARAKVKVEPALRVVEIANGNPEETLVVFEALHNLE-----PRGYVVGWIIAISLLVGILIF 995

  Fly  1003 SAATYALYKRGFFKRAIKDDLK-QLIRDSFEDG 1034
            ......|:|.|||:|..|:.:: :..|...|||
Mouse   996 LLLAVLLWKMGFFRRRYKEIIEAEKNRKENEDG 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 FG-GAP_3 335..408 CDD:433275 26/74 (35%)
Int_alpha 384..434 CDD:214549 23/53 (43%)
Int_alpha 447..>492 CDD:214549 20/44 (45%)
Integrin_alpha2 486..808 CDD:462478 81/385 (21%)
Itga9NP_598482.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 36..97 14/66 (21%)
Int_alpha 45..102 CDD:214549 14/62 (23%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..175 20/81 (25%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 183..233 12/64 (19%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 234..290 18/63 (29%)
Int_alpha 245..295 CDD:214549 17/52 (33%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 291..350 22/61 (36%)
Int_alpha 301..348 CDD:214549 20/49 (41%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 352..409 24/58 (41%)
Int_alpha 362..415 CDD:214549 24/54 (44%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 412..475 23/65 (35%)
Int_alpha 426..>467 CDD:214549 20/40 (50%)
Integrin_alpha2 461..904 CDD:462478 100/488 (20%)
GFFKR motif. /evidence=ECO:0000250|UniProtKB:Q13797 1006..1010 3/3 (100%)

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