DRSC/TRiP Functional Genomics Resources

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Protein Alignment ItgaPS4 and Itga9

DIOPT Version :9

Sequence 1:NP_611025.2 Gene:ItgaPS4 / 36693 FlyBaseID:FBgn0034005 Length:1069 Species:Drosophila melanogaster
Sequence 2:NP_598482.2 Gene:Itga9 / 104099 MGIID:104756 Length:1036 Species:Mus musculus


Alignment Length:1138 Identity:283/1138 - (24%)
Similarity:487/1138 - (42%) Gaps:234/1138 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLV----IREKSIMVAAPRANSSL 65
            |::.|:|......|||:.  ....:.|....|    |:||::::    ...:.::|.||:|:|..
Mouse    17 LLLALVAAGVPAGAYNLD--AQRPVRFQGPSG----SFFGYAVLEHFHDNTRWVLVGAPKADSKY 75

  Fly    66 EAQRNISEPGVIFRC--YFESGNNCSPYNIDTKGNYKGMPNDGLLTAKNKDFRWLGGAMDGGTRD 128
            ..  ::..||.:|:|  :......|:..:: .:|..:|.| .|.....::|..|:|.::....|.
Mouse    76 ST--SVKSPGAVFKCRVHTNPDRRCTELDM-ARGRTRGAP-CGKTCRGDRDDEWMGVSLARQPRA 136

  Fly   129 SDKFLVCAPRFYSINNENDY--NNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIP 191
            ..:.|.||.|:.:|..|.|:  .:|.||.:   |.|:.:            |.:|       |||
Mouse   137 DGRVLACAHRWKNIYYEADHILPHGFCYLI---PSNLQA------------KGKV-------LIP 179

  Fly   192 YY-----SMGE------LGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGM 245
            .|     ..||      .|::...:::  .::|||||...|.|::.:.....             
Mouse   180 CYEEYKKKYGEEHGSCQAGIAGFFTEE--LVVMGAPGSFYWAGTLKVLNLTD------------- 229

  Fly   246 NTNRKCNECNPEPKNFGQEEFSYFGYAVSSGYFDSSNLSTVLYVATAPRGNNQFGEAYIF--DIY 308
            ||..|.|:     :......::|.||||::|:|...:::.|  |..||: :...|:.|||  |..
Mouse   230 NTYFKLND-----EAIMNRRYTYLGYAVTAGHFSHPSITDV--VGGAPQ-DEGIGKVYIFRADRR 286

  Fly   309 EDSIYKYHEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYA-LRNSYDDGAIYVFINKGSFT 372
            ..::.|..:..|...|.|||.|:.|.|||.||.:|:::.||::: :|   |:|.:.|::|:|...
Mouse   287 SGTLIKIFQASGKKMGSYFGSSLCAVDLNMDGLSDLLVGAPMFSEIR---DEGQVTVYLNQGHGA 348

  Fly   373 FEERI-IRSPAGSGGRFGTTLSRIGDINKDGYNDVAVGAP----FAGNGSVFIYLGSENGLRDPP 432
            .||:: :...|.....||.:::.:|||:.||:.|||||||    ||  |:|:||.|..||:....
Mouse   349 LEEQLTLTGDAAYNAHFGESIANLGDIDDDGFPDVAVGAPKEEDFA--GAVYIYHGDANGIVPKY 411

  Fly   433 SQCLDAPSQQPSKYGSYMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKIHA----- 492
            |..|......|:   ..|||..:|.|.|:||||:.|..|||..:::|.|.||.||:.:..     
Mouse   412 SMKLSGRRLNPT---LRMFGQSISGGIDMDGNGYPDVTIGAFLSDSVVLLRARPVITVDVSIFLP 473

  Fly   493 ----IIKPKLQNVNPEEERVNITVCYRLSSKSDSKAKALMEQELVIRIDIDTKSK-----IKLAV 548
                |..|:..:.......:|:|||:|...|:......|   ...:..|:..|.|     :...:
Mouse   474 GSINITAPQCHDGQQPVNCLNVTVCFRFHGKNVPGEIGL---NYNLTADVAQKEKGQLPRVYFVL 535

  Fly   549 FDEEHGSQMSFKAKAFH-EEICSEFQIEMDKRAK--FTPIALEMQYELSKKIPNSGDFCEDCAVV 610
            |.|..| |:|.:.:..| :|:|..:...:.:|.:  .:||..|..|.|.:.:...    ||..:.
Mouse   536 FGETAG-QVSERLQLSHMDEVCHHYVAHVKRRVQDVISPIVFEAAYSLDEHVMGE----EDRELP 595

  Fly   611 DPAEPKFVTEYI--------------TFNTGCATDVCVADLKI-------SCINASSTLVLGTTA 654
            |      :|..:              .|...|.::.|.|||::       |....:..|.||...
Mouse   596 D------LTPVLRWKKGQRISQKNQTVFERNCQSEDCAADLQLRGKLLLSSVDEKTPHLALGAVK 654

  Fly   655 VLRLTYNITNNGEFAYHPKFSVTNSAGL------SLAQVPGNCKVNEA-VMVCDLNHGQRMAKGD 712
            .:.|..:|:|.|:.||....|...|..|      ...::..:|::.|: .:.|.:......:|..
Mouse   655 NISLNISISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLESDFLKCSVGFPFMRSKSK 719

  Fly   713 TDSLTISFDVRQLRGRSLEIQAEVLSARDESNPE------NNKLTNVLSLREKADIYVSGVQTND 771
            .: .::.||...|.|.. ||.:.:::|: ..|.|      :|.||..:.|..:.|..::|:.:..
Mouse   720 YE-FSVIFDTSHLSGEE-EILSFIVTAQ-SGNLERSEALHDNTLTLTVPLVHEVDTSITGIVSPT 781

  Fly   772 HVVLKESPYTAEVVNYYEIKSH-------------GPSTLENLTVSLYIPVAYKTP---DSTNVK 820
            ..|..||...:..:...:.:.|             |||||...:||:..| :..:|   :...|:
Mouse   782 SFVYGESVDASNFIQLDDQECHFQPVNITLQVYNMGPSTLPGSSVSISFP-SRLSPGGAEMFQVQ 845

  Fly   821 HIVTSSPK----IQSKYAHKIMPINFIDQNNALANNFAIDHDQSTLLFSATPQHENVGNLSGIVE 881
            .:|.|..|    :|......|:|   .:|.|.....||        .||.:.:            
Mouse   846 DMVVSQEKGNCSLQRNPTPCIIP---QEQENIFHTIFA--------FFSKSGR------------ 887

  Fly   882 QNPSISLLNEDLPVNNTLVLNCQDTNVTLCVPVEIRLENGLQLKPEELMNMTVSFTVNLKDADDI 946
                 .:|:.:.|.:..|.|:|   |::.....|.|..|...|...|::.         ||:..:
Mouse   888 -----KVLDCEKPGSFCLTLHC---NLSALPKEESRTINLYMLLNTEILK---------KDSSSV 935

  Fly   947 WEYFV-----IQTDLKVHKI--GDP--TLSSFTIEKKIESNVICKHAEIAIWKIIVSVIVGILVF 1002
            .::..     ::..|:|.:|  |:|  ||..|.....:|     ....:..|.|.:|::||||:|
Mouse   936 IQFMARAKVKVEPALRVVEIANGNPEETLVVFEALHNLE-----PRGYVVGWIIAISLLVGILIF 995

  Fly  1003 SAATYALYKRGFFKRAIKDDLK-QLIRDSFEDG 1034
            ......|:|.|||:|..|:.:: :..|...|||
Mouse   996 LLLAVLLWKMGFFRRRYKEIIEAEKNRKENEDG 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItgaPS4NP_611025.2 VCBS 335..408 CDD:290251 26/74 (35%)
Int_alpha 384..434 CDD:214549 23/53 (43%)
Int_alpha 447..>492 CDD:214549 20/44 (45%)
Integrin_alpha2 484..808 CDD:285619 82/387 (21%)
Itga9NP_598482.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 36..97 14/66 (21%)
Int_alpha 45..102 CDD:214549 14/62 (23%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..175 20/81 (25%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 183..233 12/64 (19%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 234..290 18/63 (29%)
Int_alpha 245..295 CDD:214549 17/52 (33%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 291..350 22/61 (36%)
Int_alpha 301..348 CDD:214549 20/49 (41%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 352..409 24/58 (41%)
Int_alpha 362..415 CDD:214549 24/54 (44%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 412..475 23/65 (35%)
Int_alpha 426..>467 CDD:214549 20/40 (50%)
Integrin_alpha2 460..904 CDD:285619 101/489 (21%)
GFFKR motif. /evidence=ECO:0000250|UniProtKB:Q13797 1006..1010 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832076
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.810

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