Sequence 1: | NP_611025.2 | Gene: | ItgaPS4 / 36693 | FlyBaseID: | FBgn0034005 | Length: | 1069 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002664631.3 | Gene: | itgae.1 / 100333951 | ZFINID: | ZDB-GENE-131121-125 | Length: | 547 | Species: | Danio rerio |
Alignment Length: | 732 | Identity: | 138/732 - (18%) |
---|---|---|---|
Similarity: | 253/732 - (34%) | Gaps: | 267/732 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LLVIVLLALQSEINAYNISPYPNSVLNFPELEGNRRSSYFGFSLVIREKSIMVAAPRANSSLEAQ 68
Fly 69 RNISEPGVIFRCYFESGNNCSPYNIDTKGNYKGM---PNDGLLTAKNKDFRWLGGAMDGGTRDSD 130
Fly 131 KFLVCAPRFYSINNENDYNNGMCYWLSDTPKNIDSTEVMEKWPLRIEKKQVLKLADTNLIPYYSM 195
Fly 196 GELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQRRGMNTNRKCNECNPEPKN 260
Fly 261 FGQEEFSY---FGYAVSSGY----FDSSNLSTVLYVATAPRGNNQFGEAYIFDIYED---SIYKY 315
Fly 316 HEFRGNHFGEYFGYSVLAEDLNGDGKTDVIISAPLYALRNSYDDGA-IYVFINKGSFTFEERIIR 379
Fly 380 SPAGSGGRFGTTLSRIGDINK---DGYNDVAVGAPFAGNGSVFIYLGSENGLRDPPSQCLDAPSQ 441
Fly 442 -----QPSKY---GSYM----FGHGLSRG----SD--------IDGNGF---NDFAIGAPNAEAV 479
Fly 480 YLYRA------------YPVVKIHAIIKPKLQNVNPEEERVNITVCYRLSSKSDSKAKALMEQEL 532
Fly 533 VIRIDIDTK-----SKIKLAVFDEEHGSQMSFKAKAFHEEICSEFQIEMDKRAKFTPIALE---- 588
Fly 589 -------MQYELS-----KKIPNSGDFCEDCAVVDPAEPKFVTEYITFNTGCATDVCVADLKISC 641
Fly 642 INASSTLVLGTTAVLRL 658 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ItgaPS4 | NP_611025.2 | VCBS | 335..408 | CDD:290251 | 16/76 (21%) |
Int_alpha | 384..434 | CDD:214549 | 8/52 (15%) | ||
Int_alpha | 447..>492 | CDD:214549 | 13/75 (17%) | ||
Integrin_alpha2 | 484..808 | CDD:285619 | 38/208 (18%) | ||
itgae.1 | XP_002664631.3 | vWFA | 157..332 | CDD:294047 | 48/252 (19%) |
vWFA | 348..523 | CDD:294047 | 36/212 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574898 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |