Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334930.1 | Gene: | itga1 / 570868 | ZFINID: | ZDB-GENE-091118-115 | Length: | 1183 | Species: | Danio rerio |
Alignment Length: | 1372 | Identity: | 266/1372 - (19%) |
---|---|---|---|
Similarity: | 480/1372 - (34%) | Gaps: | 480/1372 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 STMFPHIFLALLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIRQTS----II 65
Fly 66 VGAPRAQSTLESQRTINETGAIYRC---SLTNGVCSPYVLDSRGNVDAPYSEYTFDSERKDFQWL 127
Fly 128 GGSM----DGGTKDTDKLLVCAPRFYAPSSRDNHLHGVC------YWVNNTVASTPQ-------- 174
Fly 175 --------------HVT----------RISPLRL--------------------KSEQVK----- 190
Fly 191 ---------------------------------------------------------EEDN---- 194
Fly 195 -----------------------------------------------------GNK--------- 197
Fly 198 ---ASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRGSVILYR-------QVDPVDNPTASRRD 252
Fly 253 TSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTKLLYVATAPQ 317
Fly 318 ANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTDV-IVSAPQHALEDSHD 381
Fly 382 NGAIYVF-INKGFFNFERQILRSPVETM--------------------ARFGTALSRLGDINHDG 425
Fly 426 YNDVAVGAPFAGN--GTVFIYLGSENGLRDQPSQRLDAPSQQPSKYGSHMFGHGLSRGSDIDGNG 488
Fly 489 FNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESREIKPEQE---------KVKITACYRLSTTST 544
Fly 545 DKLVQEQELAIRIAMD--KQLKRVKFTQTQTNEISFKVNANFGEQCRD--FETQVRYSEKDIFTP 605
Fly 606 IDLEMHYELTKK----VPDSE---EFCETCAIVDPTEPKVSTQNIIFSTGC-ATDVCTADLQLR- 661
Fly 662 SKDVSPTYILGSADTLRLNYEITNIGETAYLPQFNVTSTSRLAFAQV---PGNCKVVDAVMVCDL 723
Fly 724 NRGRPLAKGDTDSVTISFDVSQLSGQSLIIHAEVFSTGYEQNPTDNRQTNVIGLKEFTEIDASGG 788
Fly 789 QTNSQIDLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQA 853
Fly 854 SYDSQLLSIDLYDQ-------NNTMLVVDPVEVTTTL-------SGGLERTVITQNRQSYDIHTS 904
Fly 905 GHVHQTMEVLDTSMVATASMSRKRRDLKALTANREQYARISNVKAHDLLSDDFKGKLPVNRTIVF 969
Fly 970 NCRDPEMTICVRAEMRVHFRPEKSINLNMRYSVDLNEVN--------AILVDPWEYFVILTDLKL 1026
Fly 1027 QKKGDPTSTSFSINRRI---EPNI-ISKHQETGLPIWIIIVSVIGGLLLLSAISYLLYKFGFFNR 1087
Fly 1088 TKKDELD 1094 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 16/58 (28%) |
FG-GAP | 350..388 | CDD:280083 | 12/38 (32%) | ||
Int_alpha | 409..459 | CDD:214549 | 19/51 (37%) | ||
Int_alpha | 473..>515 | CDD:214549 | 11/41 (27%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 61/346 (18%) | ||
itga1 | XP_021334930.1 | vWFA | 167..348 | CDD:320736 | 10/180 (6%) |
Int_alpha | 482..532 | CDD:214549 | 16/49 (33%) | ||
Int_alpha | 565..618 | CDD:214549 | 19/52 (37%) | ||
Integrin_alpha2 | 661..1070 | CDD:312071 | 94/529 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574929 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |