DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scb and zmp:0000001082

DIOPT Version :9

Sequence 1:NP_523750.2 Gene:scb / 36692 FlyBaseID:FBgn0286785 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001373553.1 Gene:zmp:0000001082 / 557935 ZFINID:ZDB-GENE-140106-42 Length:1151 Species:Danio rerio


Alignment Length:1281 Identity:272/1281 - (21%)
Similarity:454/1281 - (35%) Gaps:370/1281 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESTMFPHIFLALLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIRQ----TSI 64
            |..:|..:..|.|:     ||||.......|.|.          :.:.:|||:  :.|    |.|
Zfish     2 EMCVFTLLMCACLS-----EAFNMDTEHPLVYNG----------SAADFFGYS--VHQSESSTQI 49

  Fly    65 IVGAPRAQSTLESQRTINETGAIYRCS-------------------------------LTNGVCS 98
            |||||.|:         |.||.||.|:                               ||:  ||
Zfish    50 IVGAPLAR---------NSTGEIYTCASDLRSCKALRRPDSERVRFFSMSVSVSPDAPLTS--CS 103

  Fly    99 PYV--------------------LDSRGNVDAPYSEYT---------FDSER----------KDF 124
            ||:                    |.:..|..|.|.|.|         ||..|          |||
Zfish   104 PYLPHDCDGNSYLNGICYQFNSGLQAVSNFTAAYQECTKREVNLVFLFDGSRSMKPEEFDLNKDF 168

  Fly   125 QWLGGSMDGGTKDTDKLLVCAPRFYAPS-----------------------SRDNHL------HG 160
            .         |....||...:.:|.|..                       .::.|:      ||
Zfish   169 I---------TDIMKKLSNSSIKFAAVQFATTFSTVFDFNDYQLGSAEQKLQKEKHMSALTNTHG 224

  Fly   161 VCYWV----NNTVAS----TPQH----VTRISPLRLKSEQVKEE-DNGNKASFFYIMGEL----- 207
            ...:|    .|.|:|    ..||    :|...|....:|.|.|: |..|...:...:|.|     
Zfish   225 AIKYVLENLLNNVSSGANPKAQHALVIITDGDPTDRDNEHVLEKCDKQNILRYIIGVGGLANLAR 289

  Fly   208 --GLSAHVADDNTKFLIGAPGINTWRGSVILYRQVDPVDNPT-ASRRDTSKALRRT------YRD 263
              .|::....:||.|:....|:.....:  |.:::..::..| |..:|..|.|.::      ::|
Zfish   290 LTSLASEPKHNNTFFIKDYKGLEGLLDN--LQKKIYNIEGSTEAHSKDRLKELSQSGFSVINHKD 352

  Fly   264 ------VDSNDYTPEHYAPEIPTPGLWGQE---------EDSYFGYAVSSGFFDSSNPTKLLYVA 313
                  |.|||:....|  |:...|...:|         :|||.||:...|   :......|: :
Zfish   353 SVIVGSVGSNDWRGSLY--EVTGSGSGVKETEIRDPFVSKDSYMGYSAVLG---ARAGVSFLF-S 411

  Fly   314 TAPQANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTD-VIVSAPQHALE 377
            .||:| :..|...:|.....|........|||.|.|||.|:...|::.||.:| ::|.||.....
Zfish   412 GAPRA-EHMGLVTLFIKNDSSWRVSWNISGEQIGSYFGASLSLLDVDSDGDSDFLLVGAPLFHQS 475

  Fly   378 DSHDNGAIYVF-INKGFFNFERQILRSPVETMARFGTALSRLGDINHDGYNDVAVGAPFA--GNG 439
            .....|.:||: .:.|.|   :::|......:.||..:|:.|.|:|.|..:|||||||..  |.|
Zfish   476 QPRAEGKLYVYTFSDGPF---QKMLNVSGSNIGRFSASLASLKDLNGDSLSDVAVGAPLENDGEG 537

  Fly   440 TVFIYLGSENGLR----DQPSQRLDAPSQQPSKYGSHMFGHGLSRGSDIDGNGFNDFAIGAPNAE 500
            .|:||||  :|:|    :...||:...|..|   |...||..||...|:..:...|..|||..  
Zfish   538 VVYIYLG--DGMRGINLNHAPQRISGRSVLP---GLQQFGVSLSGQMDMSDDNLTDVVIGARG-- 595

  Fly   501 AVYLYRAYPVVKVHATVKSESREI-----KPEQEKV----KITACYRL--STTSTDKLVQEQELA 554
            .:.|.:|.||:.|...:.....||     :...:||    .:|:|:.:  .|:|...|.::..::
Zfish   596 GMVLLKARPVMSVSVQLSFSPNEINLNYFECPSDKVLNVFNLTSCFTMKEQTSSNGSLDKKLNVS 660

  Fly   555 IRIAMD--KQLKRVKFTQTQTNEISFK--VNANFGEQCRDFETQVRYSEKDIFTPIDLEMHYELT 615
            :.:.:|  :.:.|..|.|..::..:.:  :..:.|..||.|...:.....|..:|:.:.|::.  
Zfish   661 LELNVDVMRGINRGFFVQRDSSSKALQQLLLLDSGIFCRSFPVFMPGCVADTVSPLKIRMNFS-- 723

  Fly   616 KKVPDSEEFCETCAIVDPTEPKVSTQNIIFSTGC-ATDVCTADLQLRSKDVSPTYILGSADTLRL 679
                .||....:.|::|..........:.|...| :.:.|.|||:|.....:.|.::.:.....|
Zfish   724 ----QSEMSGSSVAVLDVYSRTEEYVEVPFQRNCNSNNSCVADLKLDFSFRNNTLVVANQAHFTL 784

  Fly   680 NYEITNIGETAY-------------LPQFNVTSTSRLAFAQVPGNCKVVDA----VMVCDLNRGR 727
            ...:.|.|:.::             |..|.....||     ...:|...|:    ...|.:|  .
Zfish   785 LISLENPGDDSFNTSIVLHYPDGLSLSNFLTVKPSR-----TRSSCGDRDSGATNRTTCSIN--L 842

  Fly   728 PLAK-GDTDSVTISFDVSQLSGQSLIIHAEVFSTGYEQNPTDNRQTNVIGLKEFTEIDASGGQTN 791
            |:.: |.|.....:|.||:....    .:::.......|..:|..|:...::....:..:     
Zfish   843 PVYRSGTTTQFQATFRVSKWDYD----WSDMMEMMITANSDNNGNTSAAAVRRSVPVQFA----- 898

  Fly   792 SQIDLEHYSNSAEIVN--NYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQAS 854
              :|:....::.:.|.  |:.::..||..:.         |.|||..       :.|..|     
Zfish   899 --VDVAISLSAEDSVTYLNFSLEDRGPKPLR---------IVYKVEN-------LGVKGL----- 940

  Fly   855 YDSQLLSIDLYDQNNTMLVVDPVEVTTTLSGGLERTVITQNRQSYDIHTSGHVHQTMEVLDTSMV 919
                                 ||.|:..|.  ...|.:..::|.:.:..:          .|.:.
Zfish   941 ---------------------PVRVSLHLP--CPTTPVRLSKQKFSVQQN----------STDVA 972

  Fly   920 ATASMSRKRRDLKALTANREQYARISNVKAHDLLSDDFKGKLPVNRTIVFNCRDPEMTICVRAEM 984
            .|:|.......::....:.::::.:..:...|......|                      ..|.
Zfish   973 CTSSEDDHCETIECSQFHLDKHSVVQFILTADATFQSVK----------------------EYES 1015

  Fly   985 RVHFRP-EKSINLNMRYSVDLNEVNAILVDPWEYFVILTDLKLQKKGDPTSTSFSINRR--IEPN 1046
            :..|:. .|..:||:  |.:||...:      .|....|.|    |.||..:..::...  :.||
Zfish  1016 KFSFQELRKDFSLNI--SAELNYNRS------RYNQTSTGL----KDDPHKSQITVKAEFVLPPN 1068

  Fly  1047 IISKHQETGLPIWIIIVSVIGGLLLLSAISYLLYKFGFFNRTKKDE 1092
                      .:.||.|...|||:||..|.:||.|.|||.|.:.:|
Zfish  1069 ----------RMLIISVGAGGGLILLIIIFFLLVKCGFFKRRRPEE 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scbNP_523750.2 Int_alpha 51..103 CDD:214549 24/106 (23%)
FG-GAP 350..388 CDD:280083 12/38 (32%)
Int_alpha 409..459 CDD:214549 24/55 (44%)
Int_alpha 473..>515 CDD:214549 14/41 (34%)
Integrin_alpha2 507..829 CDD:285619 61/357 (17%)
zmp:0000001082NP_001373553.1 vWFA 145..314 CDD:412136 34/177 (19%)
Int_alpha 443..491 CDD:214549 15/47 (32%)
Int_alpha 505..>546 CDD:214549 21/42 (50%)
Integrin_alpha2 602..951 CDD:400650 71/416 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574953
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23220
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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