Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167466.1 | Gene: | itga6a / 503893 | ZFINID: | ZDB-GENE-050309-23 | Length: | 1092 | Species: | Danio rerio |
Alignment Length: | 1190 | Identity: | 274/1190 - (23%) |
---|---|---|---|
Similarity: | 474/1190 - (39%) | Gaps: | 330/1190 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 SYFGYTLVIR-------QTSIIVGAPRAQSTLESQRTINETGAIYRCSLTN--GVCSPYVLDSRG 106
Fly 107 NVDAPYSEYTFDSERKDFQWLGGSMD----GGTKDTDKLLVCAPRFY-------APSSRDNHLHG 160
Fly 161 VCYWVNNTVASTPQHVTRISPLRLKSEQVKEEDNGNKASFFYIMG-----------ELGLSAHVA 214
Fly 215 DDNTKFLIGAPGINTWRGSVILYRQVDPV-------DNPTASRRDTSKALRRTYRDVDSNDYTPE 272
Fly 273 HYAPEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVRGK---S 334
Fly 335 IHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTDVIVSAPQHALEDSHDNGAIYVFINKGFFNFERQ 399
Fly 400 ILRSPVETM----ARFGTALSRLGDINHDGYNDVAVGAPFA--GNGTVFIYLGSENGLRDQPSQR 458
Fly 459 LDAPSQQPSKYGSHMFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESRE 523
Fly 524 IKPEQEK------VKITAC--YRLS-TTSTDKLV-----------QEQELAIRIAMDKQLKRVKF 568
Fly 569 TQTQTNEISFKVNANFGEQCRDFETQVRYS----EKDIFTPIDLEMHYELTKKVPDSEEFCETCA 629
Fly 630 IVDPTEP-KVSTQNIIFSTGCATD-VCTADLQLR--------SKDVSPTY-------ILGSADTL 677
Fly 678 RLNYEIT-------NIGETAYLPQFNVTSTSRLAFAQVPGNCKVVDAVMVCDLNRGRPLA----- 730
Fly 731 ---KGDTDSVTISFDVSQLSGQSLIIHAEVFSTGYEQNPTDNRQTNVIGLKEFTEIDASGGQTNS 792
Fly 793 QIDLEHYSNSAEIVNNYEIKSNG---PSVI-------------EQLTVSFYIPIAYKVAGSTAII 841
Fly 842 PIINVTSLKMQ----ASYDSQLLSIDLYDQNNTMLV-------VDPVEVTTTL------------ 883
Fly 884 -SGGLERTVITQNRQSYDIHTSG-----HVHQTMEVLDTSMVATASMSRKRRDLKALTANREQYA 942
Fly 943 RISNVKAHDLLSDDFKGKLPVNRTIVFNCRDPEMTICVRAEMRVHFRPEKSINLNMRYSVDLNEV 1007
Fly 1008 NAILVDPWEYFVILTDLKLQKKGDPTSTSFSINRRIEPNIISKHQETGLPIWIIIVSVIGGLLLL 1072
Fly 1073 SAISYLLYKFGFFNRTKKDE 1092 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 17/60 (28%) |
FG-GAP | 350..388 | CDD:280083 | 20/37 (54%) | ||
Int_alpha | 409..459 | CDD:214549 | 23/51 (45%) | ||
Int_alpha | 473..>515 | CDD:214549 | 14/41 (34%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 73/393 (19%) | ||
itga6a | XP_005167466.1 | Int_alpha | 40..101 | CDD:214549 | 18/62 (29%) |
Int_alpha | 257..>293 | CDD:214549 | 14/43 (33%) | ||
Int_alpha | 318..368 | CDD:214549 | 25/51 (49%) | ||
Int_alpha | 378..431 | CDD:214549 | 23/52 (44%) | ||
Int_alpha | 440..>463 | CDD:214549 | 9/22 (41%) | ||
Integrin_alpha2 | 476..939 | CDD:285619 | 90/499 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574964 | |
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10420 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |