Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_574569.3 | Gene: | Itgax / 499271 | RGDID: | 1561123 | Length: | 1182 | Species: | Rattus norvegicus |
Alignment Length: | 1374 | Identity: | 285/1374 - (20%) |
---|---|---|---|
Similarity: | 459/1374 - (33%) | Gaps: | 478/1374 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIRQTS-IIVGAPRAQSTLESQ 78
Fly 79 RTINETGAIYRCSLTNGVCSP-------------------------------------------- 99
Fly 100 ---YVLDS--RGNVDAPYSE---------------------YTFDSER----------------- 121
Fly 122 -----------------KDF-------------QWLGGS-----------------MDGGTKDTD 139
Fly 140 KLLV--------------------------------CAPRFYAPSSRDNHLHGVCYWVNNTVAST 172
Fly 173 PQH-----VTRISPLRLKSEQVKEE-------DNGNKASFFYIMGELGLSAHVADDNTKFLIGAP 225
Fly 226 GINTWRGSVILYRQVDPVDNPTASRRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDS 290
Fly 291 YFGYAVSSGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSVL 355
Fly 356 AEDLNGDGKTDVIVSAPQHALEDSHDNGAIYVFINKGF---FNFERQILRSPVETMARFGTALSR 417
Fly 418 LGDINHDGYNDVAVGAP--FAGNGTVFIYLG-SENGLRDQPSQRLDAPSQQPS-KYGSHMFGHGL 478
Fly 479 SRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESREIK-----------PEQEKVK 532
Fly 533 ITACYRLSTTSTDKLVQEQELAIRIAMDKQL------KRVKFTQTQTNEISFKVNANFGEQCRDF 591
Fly 592 ETQVRYSEKDIFTPIDLEMHYELT-KKVPDSEEFCETCAIVDPTEPKVSTQNIIFSTGCATD-VC 654
Fly 655 TADLQL--RSKDVSPTYILGSADTLRLNYEITNIGETAYLPQFNV-----TSTSRLAFAQVPGNC 712
Fly 713 KVVDAV-----------MVCDLNRGRP--------------LAKGDTDSVTISFDVSQLS--GQS 750
Fly 751 LIIHAEVFSTGYEQNPTDNRQTN--------------VIGLKEFTE-IDASGGQTNSQIDLEHYS 800
Fly 801 NSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQASYDSQLLSIDLY 865
Fly 866 DQNNTMLVVDPVEVTTTLSGGLERTVITQNR---QSYDIHTSGHVHQTMEVLDTSMVATASMSRK 927
Fly 928 RRDLKALTANREQYARISNVKAHDLLSDDF--KGKLP---VNRTIVFNCRDPEMTICVRAEMRVH 987
Fly 988 FRPEKSINLNMRYSVDLNEVNAILVDPWEYFVILTDLKLQKKGDPTSTSFSINRRIEPNIISKHQ 1052
Fly 1053 ETGLPIWIIIVSVIGGLLLLSAISYLLYKFGFFNRTKKDEL---------------DRLVQQNPV 1102
Fly 1103 EPEAENLNS 1111 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 17/99 (17%) |
FG-GAP | 350..388 | CDD:280083 | 10/37 (27%) | ||
Int_alpha | 409..459 | CDD:214549 | 24/52 (46%) | ||
Int_alpha | 473..>515 | CDD:214549 | 14/41 (34%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 75/389 (19%) | ||
Itgax | XP_574569.3 | vWA_integrins_alpha_subunit | 150..325 | CDD:238746 | 23/184 (13%) |
Int_alpha | 454..510 | CDD:214549 | 15/56 (27%) | ||
Int_alpha | 517..572 | CDD:214549 | 24/54 (44%) | ||
Int_alpha | 582..>606 | CDD:214549 | 11/27 (41%) | ||
Integrin_alpha2 | 615..986 | CDD:285619 | 77/409 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335752 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |