DRSC/TRiP Functional Genomics Resources

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Protein Alignment scb and ITGA3

DIOPT Version :10

Sequence 1:NP_523750.2 Gene:scb / 36692 FlyBaseID:FBgn0286785 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_002195.1 Gene:ITGA3 / 3675 HGNCID:6139 Length:1051 Species:Homo sapiens


Alignment Length:1206 Identity:267/1206 - (22%)
Similarity:462/1206 - (38%) Gaps:281/1206 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PHIFLALLALI-----SHIEAFNFMPR--PSRVINSPKHLKFHINQTRSSYFGYTLVI-RQTS-- 63
            |.:.|..|||:     ..:.|||...|  ..:...:|           .|.|||::.: |||.  
Human    12 PRLMLCALALMVAAGGCVVSAFNLDTRFLVVKEAGNP-----------GSLFGYSVALHRQTERQ 65

  Fly    64 ----IIVGAPRAQSTLESQRTINETGAIYRCSLTNGVCSPYVLDSRGNVDAPYSEYTFDSERKDF 124
                ::.||||..:..:..  .|.|||:|.|.||                    .:..|.||.:.
Human    66 QRYLLLAGAPRELAVPDGY--TNRTGAVYLCPLT--------------------AHKDDCERMNI 108

  Fly   125 -------------QWLGGSMDGGTKDTDKLLVCAPRF----YAPSSRDNHLHGVCYWVNNTVAST 172
                         .|||.:: .......::||||.|:    ::.|.....:.|.||         
Human   109 TVKNDPGHHIIEDMWLGVTV-ASQGPAGRVLVCAHRYTQVLWSGSEDQRRMVGKCY--------- 163

  Fly   173 PQHVTRISPLRLKSEQ-----VKEEDNGNKASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRG 232
                .|.:.|.|.|..     ..|..|.|.......|.:||.|.....:...|  ||||...|:|
Human   164 ----VRGNDLELDSSDDWQTYHNEMCNSNTDYLETGMCQLGTSGGFTQNTVYF--GAPGAYNWKG 222

  Fly   233 SVILYRQVDPVDNPTASRRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDSYFGYAVS 297
            :..:.::                      ::.|.::|:  :..||        .:.:.|.||.:.
Human   223 NSYMIQR----------------------KEWDLSEYS--YKDPE--------DQGNLYIGYTMQ 255

  Fly   298 SGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVR-GKSIHKYHVFRGEQFGEYFGYSVLAEDLNG 361
            .|.| ..:|..:..|..||: ::..|..::.... |..:.:..|..|.|.|.|||.::...|||.
Human   256 VGSF-ILHPKNITIVTGAPR-HRHMGAVFLLSQEAGGDLRRRQVLEGSQVGAYFGSAIALADLNN 318

  Fly   362 DGKTDVIVSAPQHALEDSHDNGAIYVFINKGFFNFERQ---ILRSPVETMARFGTALSRLGDINH 423
            ||..|::|.||.:........||||||:|:...:|...   :|..|  :.:.||.:::.:||||.
Human   319 DGWQDLLVGAPYYFERKEEVGGAIYVFMNQAGTSFPAHPSLLLHGP--SGSAFGLSVASIGDINQ 381

  Fly   424 DGYNDVAVGAPFAGNGTVFIYLGSENGLRDQPSQ-----RLDAPSQQPSKYGSHMFGHGLSRGSD 483
            ||:.|:||||||.|.|.|:||..|..||..||.|     :|..|       |...||:.||...|
Human   382 DGFQDIAVGAPFEGLGKVYIYHSSSKGLLRQPQQVIHGEKLGLP-------GLATFGYSLSGQMD 439

  Fly   484 IDGNGFNDFAIGAPNAEAVYLYRAYPVVK-VHATVKSESREIKP----EQEKVKITACYRLSTTS 543
            :|.|.:.|..:|: .::.:.|.||.||:. ||.|:......:.|    ....|::..|:..:.::
Human   440 VDENFYPDLLVGS-LSDHIVLLRARPVINIVHKTLVPRPAVLDPALCTATSCVQVELCFAYNQSA 503

  Fly   544 TDKLVQEQ-ELAIRIAMDKQLK--RVKFTQTQTNEISFKVNANFG---EQCRDFETQVRYSEKDI 602
            .:...:.. .||..:..|:..:  |::|..::    |...:..|.   .:|:..|..:..:.:|.
Human   504 GNPNYRRNITLAYTLEADRDRRPPRLRFAGSE----SAVFHGFFSMPEMRCQKLELLLMDNLRDK 564

  Fly   603 FTPIDLEMHYELTKKVPDSEEF----CETCAIVDPTEPKVSTQNIIFSTGCATD-VCTADLQLRS 662
            ..||.:.|:|.|..::||....    .:...|::..:...:...:.|...|..| .|.::||:|:
Human   565 LRPIIISMNYSLPLRMPDRPRLGLRSLDAYPILNQAQALENHTEVQFQKECGPDNKCESNLQMRA 629

  Fly   663 KDVSP-----TYILGSADT--LRLNYEITNI------GETAYLPQFNVTSTSRLAFAQV--PGNC 712
            ..||.     :.:..|.|.  |.|:..:||.      ||.|:.....:.....|..:.|  ||.|
Human   630 AFVSEQQQKLSRLQYSRDVRKLLLSINVTNTRTSERSGEDAHEALLTLVVPPALLLSSVRPPGAC 694

  Fly   713 KVVDAVMVCDLNRGRPLAKGDTDSVTISFDV--SQLSGQSLIIHAEVFSTGYEQNPTDNRQTNVI 775
            :..:.:. |:|  |.|..:.....:.|:|:|  ..|..:.|.:..::.::.::    ||....::
Human   695 QANETIF-CEL--GNPFKRNQRMELLIAFEVIGVTLHTRDLQVQLQLSTSSHQ----DNLWPMIL 752

  Fly   776 GLKEFTEIDASGGQTNSQIDLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAI 840
            .|.....:..|....|.::.        .......:..:|...:|.:.    .|:.|:.......
Human   753 TLLVDYTLQTSLSMVNHRLQ--------SFFGGTVMGESGMKTVEDVG----SPLKYEFQVGPMG 805

  Fly   841 IPIINVTSLKMQASYDSQLLSIDLYDQNNTMLVVDPVEVTTTLSGGLERTVITQNRQSYDIHTSG 905
            ..::.:.:|.:...:.        |:.:|...::.|.|:|...:|            |:.....|
Human   806 EGLVGLGTLVLGLEWP--------YEVSNGKWLLYPTEITVHGNG------------SWPCRPPG 850

  Fly   906 HVHQTMEV-LDTSMVATASMSRKRRDL--------------KALTANREQYARISNVKAHDLLSD 955
            .:...:.: |.......:|..|:||.|              .|..|..|.....:..:||     
Human   851 DLINPLNLTLSDPGDRPSSPQRRRRQLDPGGGQGPPPVTLAAAKKAKSETVLTCATGRAH----- 910

  Fly   956 DFKGKLPVNRTIVFNCRDPEMTICVRAEMRVHFRPEKSINLNMRYSVDLNEVNAILVDPWEYFVI 1020
                      .:...|..|:..:.....::...       .|..:..|..:.:.:.|:.|....:
Human   911 ----------CVWLECPIPDAPVVTNVTVKARV-------WNSTFIEDYRDFDRVRVNGWATLFL 958

  Fly  1021 LTDLKLQKKGDPT------STSFSINRRIEPNIISKHQETGLP----IWIIIVSVIGGLLLLSAI 1075
            .|.:       ||      :|.||::  |:..::.:     ||    :|:::|:|..|||||..|
Human   959 RTSI-------PTINMENKTTWFSVD--IDSELVEE-----LPAEIELWLVLVAVGAGLLLLGLI 1009

  Fly  1076 SYLLYKFGFFNRTKKDELDRLVQQ------NPVEPE 1105
            ..||:|.|||.|.:...|....:|      .|.|.|
Human  1010 ILLLWKCGFFKRARTRALYEAKRQKAEMKSQPSETE 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scbNP_523750.2 Int_alpha 51..103 CDD:214549 19/58 (33%)
FG-GAP 350..388 CDD:460357 15/37 (41%)
Int_alpha 409..459 CDD:214549 26/54 (48%)
Int_alpha 473..>515 CDD:214549 15/42 (36%)
Integrin_alpha2 509..829 CDD:462478 65/352 (18%)
ITGA3NP_002195.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 38..103 21/97 (22%)
Int_alpha 48..108 CDD:214549 23/92 (25%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..171 14/74 (19%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..235 14/73 (19%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 236..292 14/67 (21%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 293..354 23/60 (38%)
Int_alpha 304..352 CDD:214549 20/47 (43%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 356..411 25/56 (45%)
Int_alpha 365..417 CDD:214549 26/51 (51%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 415..477 21/69 (30%)
Int_alpha 430..481 CDD:214549 17/51 (33%)
Integrin_alpha2 463..916 CDD:462478 87/510 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..889 6/33 (18%)
Interaction with HPS5 1015..1021 4/5 (80%)
GFFKR motif 1017..1021 3/3 (100%)

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