Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001167443.1 | Gene: | Itga8 / 364786 | RGDID: | 621634 | Length: | 1062 | Species: | Rattus norvegicus |
Alignment Length: | 1180 | Identity: | 290/1180 - (24%) |
---|---|---|---|
Similarity: | 468/1180 - (39%) | Gaps: | 259/1180 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 SPKHLKFHINQTR--------SSYFGYTLVI-----RQTSIIVGAPRAQSTLESQRTINETGAIY 88
Fly 89 RC---SLTNGVCSPYVLDSRGNVDAPYSEYTFDSERKDFQWLGGSMDGGTKDTDKLLVCAPRFYA 150
Fly 151 PSSRDNHLH---GVCYWVNNTVASTPQHVTRISPLRLKSEQVKEEDNGN-KASF---FYIMGELG 208
Fly 209 LSAHVADDNTKFLIGAPGINTWRGSVILYRQVDPVDNPTASRRDTSKALRRTYRDVDSNDYTPEH 273
Fly 274 YAPEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVRGKSIHKY 338
Fly 339 HVFRGEQFGEYFGYSVLAEDLNGDGKTDVIVSAPQHALEDSHDN----GAIYVFINKGFFNFERQ 399
Fly 400 ILRSPVETMARFGTALSRLGDINHDGYNDVAVGAPFAG---NGTVFIYLGSENGLRDQPSQRLDA 461
Fly 462 PSQQPSKYGSHM----FGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESR 522
Fly 523 EIKPEQEKVKI------TACYRL---------STTSTDKLVQEQELAIRIAMDKQLKRVKFTQTQ 572
Fly 573 TNEI--SFKVNANFGEQCRDF------ETQVRYSEKDIFTPIDLEMHYELTKKVPDS--EEFCET 627
Fly 628 CAIVDPTEPKVSTQNIIFSTGCATD-VCTADLQLRSKDVSPTYILGSADTLRLNYEITNIGETAY 691
Fly 692 LPQFNVTSTSRLAFAQVPGN--------CKV----VDAVMVCDLNRGRPLAKGDTDSVTISFDVS 744
Fly 745 QLSGQSLIIHAEV-FSTGYEQNPTDNRQTNVIGLKEFTEIDASGGQTNSQIDLE-HYSNSAE--- 804
Fly 805 --------IVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQASYDSQLLS 861
Fly 862 IDLYDQNNTMLVVDPVEVTTTLSGGLERTVITQNRQSYDIHTSGHVHQTMEVLDTSMVATASMSR 926
Fly 927 KRRDLKALTANREQYARISNVKAHDLLSDDFK-GKLPVNRTIVFNCRDPEMTICVRAEMRVHFRP 990
Fly 991 EKSINLNMRYSVDLNEVNAILVDPWEYFVILTDLKLQKKGDP----TSTSFSINR---------- 1041
Fly 1042 -----RIEPNII--SKHQETGLPIWIIIVSVIGGLLLLSAISYLLYKFGFFNRTK--KDEL-DRL 1096
Fly 1097 VQQNPVEPEA 1106 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 22/59 (37%) |
FG-GAP | 350..388 | CDD:280083 | 15/41 (37%) | ||
Int_alpha | 409..459 | CDD:214549 | 28/52 (54%) | ||
Int_alpha | 473..>515 | CDD:214549 | 18/45 (40%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 87/372 (23%) | ||
Itga8 | NP_001167443.1 | Int_alpha | 53..111 | CDD:214549 | 22/60 (37%) |
Int_alpha | 316..>364 | CDD:214549 | 16/47 (34%) | ||
Int_alpha | 382..436 | CDD:214549 | 28/53 (53%) | ||
Int_alpha | 447..491 | CDD:214549 | 18/43 (42%) | ||
Integrin_alpha2 | 482..933 | CDD:285619 | 105/500 (21%) | ||
Integrin_alpha | 1034..1048 | CDD:278771 | 6/13 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335728 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |