Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001359143.1 | Gene: | Itga3 / 360606 | RGDID: | 1310333 | Length: | 1067 | Species: | Rattus norvegicus |
Alignment Length: | 1207 | Identity: | 281/1207 - (23%) |
---|---|---|---|
Similarity: | 481/1207 - (39%) | Gaps: | 285/1207 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LALLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVI-RQTS------IIVGAPR 70
Fly 71 AQSTLESQRTINETGAIYRCSLT--NGVCSPYVLDSRGNVDAPYSEYTFDSERKDFQWLGGSMDG 133
Fly 134 GTKDTDKLLVCAPRF----YAPSSRDNHLHGVCYWVNNTVASTP------QHVTRISPLRLKSEQ 188
Fly 189 VKEEDNGNKASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRGSVILYRQVDPVDNPTASRRDT 253
Fly 254 SKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDS--YFGYAVSSGFFDSS--NPTKLLYVAT 314
Fly 315 APQANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTDVIVSAPQHALEDS 379
Fly 380 HDNGAIYVFINKGFFNFERQ---ILRSPVETMARFGTALSRLGDINHDGYNDVAVGAPFAGNGTV 441
Fly 442 FIYLGSENGLRDQPSQ-----RLDAPSQQPSKYGSHMFGHGLSRGSDIDGNGFNDFAIGAPNAEA 501
Fly 502 VYLYRAYPVVKV-HATVKSESREIKPE----QEKVKITACYRLSTTSTDKLVQEQ-ELAIRIAMD 560
Fly 561 KQLK--RVKFTQTQTNEIS--FKVNANFGEQCRDFETQVRYSEKDIFTPIDLEMHYELTKKVPDS 621
Fly 622 EEF----CETCAIVDPTEPKVSTQNIIFSTGCATD-VCTADLQLRSKDVSP-----TYILGSADT 676
Fly 677 --LRLNYEITN------IGETAY--LPQFNVTSTSRLAFAQVPGNCKVVDAVMVCDLNRGRPLAK 731
Fly 732 GDTDSVTISFDVS--QLSGQSLIIHAEVFSTGYEQNPTDNRQTNVIGLKEFTEIDASGGQTNSQI 794
Fly 795 DLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTS-LKMQ------ 852
Fly 853 ----ASYDSQLLSIDL-YDQNNTMLVVDPVEVTTTLSGGLERTVITQNRQSYDIHTSGHVHQTME 912
Fly 913 V-LDTSMVATASMSRKRRDL--------------KALTANREQYARISNVKAHDLLSDDFKGKLP 962
Fly 963 VNRTIVFNCRDPEMT----ICVRAEMRVHFRPEKSINLNMRYSVDLNEVNAILVDPWEYFVILTD 1023
Fly 1024 LKLQKKGDPT------STSFSINRRIEPNIISKHQETGLP----IWIIIVSVIGGLLLLSAISYL 1078
Fly 1079 LYKFGFFNRTK------KDELDRLVQQNPVEPEAENL 1109 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 21/60 (35%) |
FG-GAP | 350..388 | CDD:280083 | 14/37 (38%) | ||
Int_alpha | 409..459 | CDD:214549 | 26/54 (48%) | ||
Int_alpha | 473..>515 | CDD:214549 | 14/42 (33%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 72/353 (20%) | ||
Itga3 | NP_001359143.1 | Int_alpha | 48..108 | CDD:214549 | 21/63 (33%) |
Int_alpha | 304..352 | CDD:214549 | 19/47 (40%) | ||
Int_alpha | 367..417 | CDD:214549 | 26/49 (53%) | ||
Integrin_alpha2 | 462..917 | CDD:369878 | 103/522 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335732 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |