Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101169.2 | Gene: | Itga10 / 310683 | RGDID: | 1305152 | Length: | 1167 | Species: | Rattus norvegicus |
Alignment Length: | 1395 | Identity: | 274/1395 - (19%) |
---|---|---|---|
Similarity: | 460/1395 - (32%) | Gaps: | 543/1395 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 ESTMFPHIFLALLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIR----QTSI 64
Fly 65 IVGAPRAQSTLESQRTINETGAIYRCSL--------TNGVCSPYVLDSRGNVDAPYSEYTFDSER 121
Fly 122 KDFQWLGGSM-----DGGTKDTDKLLVCAPRFYAPSSRDNHLHGVCYWV---------------- 165
Fly 166 -------------NNTV-------------------------------ASTPQHVTRISPLRLKS 186
Fly 187 EQVK-----------------------------------------------EEDNG--------- 195
Fly 196 ----------------------------------------------------------------- 195
Fly 196 -------NKASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRGSVILYRQVDPVDNPTASRRDT 253
Fly 254 SKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTKLLYVATAPQA 318
Fly 319 NKQSGEAYIFDVRGKSIHKY-HVFRGEQFGEYFGYSVLAEDLNGDGKTDV-IVSAPQHALEDSHD 381
Fly 382 NGAIYVFINKGFFNFERQILRSPVETM-------ARFGTALSRLGDINHDGYNDVAVGAPF--AG 437
Fly 438 NGTVFIYLGSENGLRDQPSQRLDAPSQ-QPSKYGSHMFGHGLSRGSDIDGNGFNDFAIGAPNAEA 501
Fly 502 VYLYRAYPVVKVHATVKSESREIKPE-------------QEKVKITA--CYRLSTTSTDKLVQEQ 551
Fly 552 ELAIRIAMDKQLKRVKFTQTQTNEISFKVNANF-GEQCRDFETQVRYSEKDIFTPIDLEMHYELT 615
Fly 616 KKVPDSEEFCE------TCAIVDPTEP--------KVSTQNII-FSTGCATD-------VCTADL 658
Fly 659 QLRSKDVSPTYILGSADTLRLNYEITNIGETAYLPQFNVTSTSRLAFAQV-PGNCKVVDA----- 717
Fly 718 ---VMVCDLNRGRPLAK-GDTDSVTISFD------VSQLSGQSLIIHAEVFSTGYEQNPTDNRQT 772
Fly 773 NVIGLKEFTEIDASGGQTNSQIDLE-HYSNSAE-IVNNYE--------------------IKSNG 815
Fly 816 PSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQASYDSQLLSIDLYDQNNTMLVVDPVEVT 880
Fly 881 TTLSGGLERTVITQN---RQSYDIHTSGHVHQTMEVLDTSMVATASMSRKRRDLKALTANREQYA 942
Fly 943 RISNVKAHDLLSDDFKGKLPVNRTIVFNCRDPEMTI-CVRAEMRVHFRPE--KSINLNMRYSVDL 1004
Fly 1005 NEVNAILVD---PW--EYFVILTDLKLQKKGDPTSTSFSINRRIEPNIISKHQETGLPIWIIIVS 1064
Fly 1065 VIGGLLLLSAISYLLYKFGFFNRTK--KDE 1092 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 16/63 (25%) |
FG-GAP | 350..388 | CDD:280083 | 12/38 (32%) | ||
Int_alpha | 409..459 | CDD:214549 | 24/51 (47%) | ||
Int_alpha | 473..>515 | CDD:214549 | 12/41 (29%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 75/397 (19%) | ||
Itga10 | NP_001101169.2 | Int_alpha | 41..81 | CDD:214549 | 13/45 (29%) |
vWA_integrins_alpha_subunit | 166..346 | CDD:238746 | 9/179 (5%) | ||
Int_alpha | 482..>525 | CDD:214549 | 14/42 (33%) | ||
Int_alpha | 545..599 | CDD:214549 | 24/53 (45%) | ||
Integrin_alpha2 | 642..1050 | CDD:285619 | 92/520 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335698 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23220 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |