Sequence 1: | NP_523750.2 | Gene: | scb / 36692 | FlyBaseID: | FBgn0286785 | Length: | 1115 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006230276.1 | Gene: | Itgam / 25021 | RGDID: | 2926 | Length: | 1152 | Species: | Rattus norvegicus |
Alignment Length: | 1346 | Identity: | 263/1346 - (19%) |
---|---|---|---|
Similarity: | 469/1346 - (34%) | Gaps: | 464/1346 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLV-IRQTSIIVGAPRAQSTLESQ 78
Fly 79 RTINETGAIYRCSLTNGVCSP-------------------------------------------- 99
Fly 100 ---------------------------------YVLDSRGNVDA--------------------- 110
Fly 111 ------PYSE-----YTFDSERKD------------------------------FQWLGGSMDGG 134
Fly 135 TK------DTDK----------------------LLVCAPRFYAPSSRDNHLHGVCYWVNNTVAS 171
Fly 172 TP--QHVTRI----------SPLRLKSEQVKEEDNGNKASFFYIMGELGLSAHVADDNTKFLIGA 224
Fly 225 PGINTWRGSVILYRQVDPVDNPTASRRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEED 289
Fly 290 SYFGYAVSSGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSV 354
Fly 355 LAEDLNGDGKTDVIVSAPQHALEDSHDNGAIYVFINKGFFNFERQILRSPVETM---------AR 410
Fly 411 FGTALSRLGDINHDGYNDVAVGAP--FAGNGTVFIYLGSENGLRDQP-SQRLDAPSQQPSKYGSH 472
Fly 473 MFGHGLSRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATV----KSESREIKPEQEKV-- 531
Fly 532 -----KITACYRLSTTSTDKLVQ---EQELAIRIAMD--KQLKRVKFTQTQTNEISFKVNANFG- 585
Fly 586 -EQCRDFETQVRYSEKDIFTPIDLEMHYELT-KKVPDSEEFCETCAIVDPTEPKVSTQNIIFSTG 648
Fly 649 CATD-VCTADLQLRSKDVS-PTYILGSADTLRLNYEITNIGE-------TAYLP---QFNVTSTS 701
Fly 702 RLAFAQVPGNCKVV--------DAVM---VCDLNRGRPLAKGDTD---SVTISFDVSQLSGQSLI 752
Fly 753 IHAEVFSTGYEQN--PTDNRQTNV-IGLKEFTEIDASGGQTNSQIDLEHYSN-------SAEIVN 807
Fly 808 NYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLKMQASYDSQLLSIDLYDQNNTML 872
Fly 873 VVDPVEVTTTLSGGLERTVITQNRQSYDIHTSGHVHQTMEVLDTSMVATASMSRKRRDLKALTAN 937
Fly 938 REQYARISNVKAHDLLSDDFKGKLPVNRTIVFNCRDPEMTICVRAEMRVHFRPEKSI-------N 995
Fly 996 LNMRYSVDLNEVNAILVDPWEY------FVILTDLKLQKKGDPTSTSFSINRRIEPNIISKHQET 1054
Fly 1055 GLPIWIIIVSVIGGLLLLSAISYLLYKFGFFNRTKKDELDRLVQQN 1100 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scb | NP_523750.2 | Int_alpha | 51..103 | CDD:214549 | 14/129 (11%) |
FG-GAP | 350..388 | CDD:280083 | 10/37 (27%) | ||
Int_alpha | 409..459 | CDD:214549 | 23/52 (44%) | ||
Int_alpha | 473..>515 | CDD:214549 | 16/41 (39%) | ||
Integrin_alpha2 | 507..829 | CDD:285619 | 75/376 (20%) | ||
Itgam | XP_006230276.1 | vWA_integrins_alpha_subunit | 149..324 | CDD:238746 | 23/183 (13%) |
Int_alpha | 453..510 | CDD:214549 | 16/62 (26%) | ||
Int_alpha | 517..570 | CDD:214549 | 21/52 (40%) | ||
Int_alpha | 582..>606 | CDD:214549 | 9/23 (39%) | ||
Integrin_alpha2 | 615..1032 | CDD:285619 | 97/531 (18%) | ||
Integrin_alpha | 1129..1141 | CDD:278771 | 7/11 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |