DRSC/TRiP Functional Genomics Resources

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Protein Alignment scb and Itga3

DIOPT Version :10

Sequence 1:NP_523750.2 Gene:scb / 36692 FlyBaseID:FBgn0286785 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_001293091.1 Gene:Itga3 / 16400 MGIID:96602 Length:1068 Species:Mus musculus


Alignment Length:1230 Identity:284/1230 - (23%)
Similarity:477/1230 - (38%) Gaps:330/1230 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PRPSRVINSPKHL--------------KFHIN-QTR----------SSYFGYTLVI-RQTS---- 63
            |.|.||..:|..|              .|..| .||          .|.|||::.: |||.    
Mouse     3 PGPCRVPRAPGWLLRALALMVAACGRVAFAFNLDTRFLVVKEAVNPGSLFGYSVALHRQTERQQR 67

  Fly    64 --IIVGAPRAQSTLESQRTINETGAIYRCSLTNGVCSPYVLDSRGNVDAPYSEYTFDSERKDF-- 124
              ::.||||..:..:..  .|.|||:|.|.||                    .:..|.||.|.  
Mouse    68 YLLLAGAPRDLAVGDDY--TNRTGAVYLCPLT--------------------AHKDDCERMDISE 110

  Fly   125 -----------QWLGGSMDGGTKDTDKLLVCAPRF----YAPSSRDNHLHGVCYWVNNTVASTP- 173
                       .|||.:: .......::||||.|:    ::.......:.|.||...|.:...| 
Mouse   111 KSDPDHHIIEDMWLGVTV-ASQGPAGRVLVCAHRYTKVLWSGLEDQRRMVGKCYVRGNDLQLDPG 174

  Fly   174 -----QHVTRISPLRLKSEQVKEEDNGNKASFFYIMGELGLSAHVADDNTKFLIGAPGINTWRGS 233
                 .|              .|..|.|.......|.:||.|.....:...|  ||||...|:|:
Mouse   175 DDWQTYH--------------NEMCNSNTDYLQTGMCQLGTSGGFTQNTVYF--GAPGAYNWKGN 223

  Fly   234 VILYRQVDPVDNPTASRRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDS--YFGYAV 296
            ..:.::                      :|.|.::|:..            |.||..  |.||.|
Mouse   224 SYMIQR----------------------KDWDLSEYSYR------------GSEEQGNLYIGYTV 254

  Fly   297 SSGFFDSSN----PTKLLYVATAPQANKQSGEAYIF-DVRGKSIHKYHVFRGEQFGEYFGYSVLA 356
            ..|     |    ||.::.|.|....::..|..::. ...|..:.:..|.:|.|.|.|||.::..
Mouse   255 QVG-----NAILHPTDIITVVTGAPRHQHMGAVFLLKQESGGDLQRKQVLKGTQVGAYFGSAIAL 314

  Fly   357 EDLNGDGKTDVIVSAPQHALEDSHDNGAIYVFINKGFFNFERQ---ILRSPVETMARFGTALSRL 418
            .|||.||..|::|.||.:........||:|||:|:...:|..|   :|..|  :.:.||.:::.:
Mouse   315 ADLNNDGWQDLLVGAPYYFERKEEVGGAVYVFMNQAGASFPDQPSLLLHGP--SRSAFGISIASI 377

  Fly   419 GDINHDGYNDVAVGAPFAGNGTVFIYLGSENGLRDQPSQ-----RLDAPSQQPSKYGSHMFGHGL 478
            ||||.||:.|:||||||.|.|.|:||..|..||..||.|     :|..|       |...||:.|
Mouse   378 GDINQDGFQDIAVGAPFEGLGKVYIYHSSSGGLLRQPQQIIHGEKLGLP-------GLATFGYSL 435

  Fly   479 SRGSDIDGNGFNDFAIGAPNAEAVYLYRAYPVVKV-HATVKSESREIKP----EQEKVKITACYR 538
            |...|:|.|.:.|..:|: .::.:.|.||.||:.: |.|:.:....:.|    ....|::..|:.
Mouse   436 SGKMDVDENLYPDLLVGS-LSDHIVLLRARPVINILHRTLVARPAVLDPALCTATSCVQVELCFA 499

  Fly   539 LSTTSTDKLVQEQ-ELAIRIAMDKQLK--RVKFTQTQTNEIS--FKVNANFGEQCRDFETQVRYS 598
            .:.::.:...:.. .||..:..|:..:  |::|.::|::...  |.:...   .|:..|..:..:
Mouse   500 YNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFARSQSSVFHGFFSMPET---HCQTLELLLMDN 561

  Fly   599 EKDIFTPIDLEMHYELTKKVPDSEEF----CETCAIVDPTEPKVSTQNIIFSTGCATD-VCTADL 658
            .:|...||.:.|:|.|..::||..:.    .:...:::..:...:...:.|...|..| .|.::|
Mouse   562 VRDKLRPIVIAMNYSLPLRMPDRLKLGLRSLDAYPVLNQAQAMENHTEVHFQKECGPDNKCDSNL 626

  Fly   659 QLR----SKDVSP-TYILGSADT--LRLNYEITN------IGETAY--LPQFNVTSTSRLAFAQV 708
            |:|    |:.:.| :.:..|.||  |.|:..:||      .||.|:  |....|.|...|:..:.
Mouse   627 QMRAAFLSEQLQPLSRLQYSRDTKKLFLSINVTNSPSSQRAGEDAHEALLTLEVPSALLLSSVRP 691

  Fly   709 PGNCKVVDAVMVCDLNRGRPLAKGDTDSVTISFDV--SQLSGQSLIIHAEVFSTGYEQNPTDNRQ 771
            .|.|:..:..::|:|  |.|..:.....:.|:|:|  ..|..:.|.:..::.::.::    ||.|
Mouse   692 SGTCQANNETILCEL--GNPFKRNQRMELLIAFEVIGVTLHTRDLPVLLQLSTSSHQ----DNLQ 750

  Fly   772 TNVIGLKEFTEIDASGGQTNSQIDLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAG 836
            ..::.|               |:|   |:..|.:           |::.....||:   ...|.|
Mouse   751 PVLLTL---------------QVD---YTLQASL-----------SLMNHRLQSFF---GGTVMG 783

  Fly   837 STAIIPIINVTS-LKMQ----------ASYDSQLLSIDL-YDQNNTMLVVDPVEVTTTLSGGLER 889
            ..|:....:|.| ||.:          |:..:.:|.::. |:..|...::.|.|:|...:|    
Mouse   784 EAAMKTAEDVGSPLKYEFQVSPVGDGLAALGTLVLGLEWPYEVTNGKWLLYPTEITIHSNG---- 844

  Fly   890 TVITQNRQSYDIHTSGHVHQTMEV-LDTSMVATASMSRKRRDL--------------KALTANRE 939
                    |:....||::...:.: |....|...|..|:||.|              .|..|..|
Mouse   845 --------SWPCQPSGNLVNPLNLTLSDPGVTPLSPQRRRRQLDPGGDQSSPPVTLAAAKKAKSE 901

  Fly   940 QYARISNVKAHDLLSDDFKGKLPVNRTIVFNCRDPEMT----ICVRAEMRVHFRPEKSINLNMRY 1000
            .....||.:|               |.:...|..|:.:    :.|:|.:           .|..:
Mouse   902 TVLTCSNGRA---------------RCVWLECPLPDTSNITNVTVKARV-----------WNSTF 940

  Fly  1001 SVDLNEVNAILVDPWEYFVILTDLKLQKKGDPT------STSFSINRRIEPNIISKHQETGLP-- 1057
            ..|..:.:.:.||.|....:.|.:       ||      :|.||::  |:..::.:     ||  
Mouse   941 IEDYKDFDRVRVDGWATLFLRTSI-------PTINMENKTTWFSVD--IDSELVEE-----LPAE 991

  Fly  1058 --IWIIIVSVIGGLLLLSAISYLLYKFGFFNRTK------KDELDRLVQQNPVEPEAENL 1109
              :|:::|:|..|||||..|..||:|..||..|:      |....|:.:::...|....|
Mouse   992 IELWLVLVAVGAGLLLLGLIILLLWKCDFFKPTRYYRIMPKYHAVRIREEDRYPPPGSTL 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scbNP_523750.2 Int_alpha 51..103 CDD:214549 19/58 (33%)
FG-GAP 350..388 CDD:460357 14/37 (38%)
Int_alpha 409..459 CDD:214549 26/54 (48%)
Int_alpha 473..>515 CDD:214549 14/42 (33%)
Integrin_alpha2 509..829 CDD:462478 69/351 (20%)
Itga3NP_001293091.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 38..103 20/86 (23%)
Int_alpha 48..108 CDD:214549 22/81 (27%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..171 12/61 (20%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..235 15/73 (21%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 236..293 16/73 (22%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 294..355 22/60 (37%)
Int_alpha 305..353 CDD:214549 19/47 (40%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 357..412 26/56 (46%)
Int_alpha 368..418 CDD:214549 26/49 (53%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 416..478 20/69 (29%)
Integrin_alpha2 464..918 CDD:462478 101/521 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 865..890 6/24 (25%)

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