DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scb and if

DIOPT Version :10

Sequence 1:NP_523750.2 Gene:scb / 36692 FlyBaseID:FBgn0286785 Length:1115 Species:Drosophila melanogaster
Sequence 2:XP_061518066.1 Gene:if / 1272247 VectorBaseID:AGAMI1_012318 Length:1538 Species:Anopheles gambiae


Alignment Length:995 Identity:247/995 - (24%)
Similarity:405/995 - (40%) Gaps:212/995 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IFLALLALISHIEAFNFMPRPSRVINSPKHLKFHINQTRSSYFGYTLVIRQTS----IIVGAPRA 71
            ::|...|...:::..||:.:.    ..|           ||.||:::.:.:..    :|||||.|
Mosquito    33 VWLGQTATAFNLDTINFILKE----GDP-----------SSMFGFSVALHREQNNSWVIVGAPTA 82

  Fly    72 QSTLESQRTINETGAIYRCSLTNGV-CSPYVLDSRGNVDAPYSEYTFDSERKDFQWLGGSMDGGT 135
            .:   ||..:.:.||:|||.:.:.. |.....|::||.   |::.....:.|..||.|.::....
Mosquito    83 NT---SQPGVIKGGAVYRCDIYDDYRCYLLPFDTKGNT---YNDQNEQIDTKSNQWFGATVASAG 141

  Fly   136 KDTDKLLVCAPRFYAPSSRDNHLH-----GVCYWVNNTVASTPQHVTRISPLRLKSEQVKEEDNG 195
            .| ..|:.||||:.....:.....     |.||...|.:    |:...|||.|            
Mosquito   142 ID-GPLVACAPRYVFHQLQPRKAERVEPVGTCYLAKNNM----QNFEDISPCR------------ 189

  Fly   196 NKASF--FYIMG--ELGLSAHVADDNTKFLIGAPGINTWRGS--------VILYR---------- 238
              .::  ::..|  :.|.||.:.:|.::..|||||...|:|.        |..|:          
Mosquito   190 --TAYWGYHRQGSCQAGFSAAITNDGSRLFIGAPGSYYWQGQMYSINTDVVFPYKPPRYGHFGEG 252

  Fly   239 -QV------DPVDNPTASRRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDSYFGYAV 296
             |:      :|.|....:..||.|                               |:|||.||:.
Mosquito   253 GQIYSFSLNNPKDKVYKTLEDTKK-------------------------------EDDSYLGYSS 286

  Fly   297 SSGFFDSSNPTKLLYVATAPQANKQSGEAYIFDVRGKSIHKYHVFRGEQFGEYFGYSVLAEDLNG 361
            ::|.|:... |:.:.|. .|:..:..|:..|:   ..::.......|||.|.|||||:.|.|::|
Mosquito   287 TTGDFNGDG-TQGVAVG-KPRGARLLGKVLIY---SWNMTNQQNITGEQIGAYFGYSLAAVDVDG 346

  Fly   362 DGKTDVIVSAPQHA---LEDSHDNGAIYVFINKGFFN--FERQILRSPVETMARFGTALSRLGDI 421
            |...|:|:.||.:.   .|..::.|.:|:.......:  |.....|..|.:.||||.|:..|.|:
Mosquito   347 DKLDDLIIGAPMYTEPNNEGKYETGRVYIMYQGAAADGRFRELDTRDGVNSKARFGLAVCSLADL 411

  Fly   422 NHDGYNDVAVGAPF---AGNGTVFIYLGSENGLRDQPSQRLDAPSQQPSKYGSHMFGHGLSRGSD 483
            |.|||.|.|||||:   .|.|.|:|:.||..|...:.||.:.|.........| .||..||.|.|
Mosquito   412 NLDGYGDFAVGAPYDGPNGRGAVYIFYGSRTGPLAKASQVIQAEDMAGVTRLS-TFGFSLSGGID 475

  Fly   484 IDGNGFNDFAIGAPNAEAVYLYRAYPVVKVHATVKSESRE-----------IKPEQEKVKIT--- 534
            :|||.:.|..:||..::...:::|.||..:.|:...|.:.           :|...:.|..|   
Mosquito   476 LDGNQYPDMVVGAYESDKALVFKARPVAAMVASTLFEPKSKLIALDVKNCALKRTNKTVPCTVVN 540

  Fly   535 ACYRLSTTSTDKLVQEQELAIRIAMDKQLKR----------VKFTQTQTNEISFKVNANFGEQCR 589
            :|.:.:..:...::   ::.|...:|.:..|          ...|:||...:     |....:|.
Mosquito   541 SCLKYNGINVPPML---DIEISWTLDARKARNPRMFFLDHEGNHTRTQLMRL-----ARGKLECI 597

  Fly   590 DFETQVRYSEKDIFTPIDLEMHYELTKKVPDSEE--FCETCAIVDPTEPKVSTQNIIFSTGCATD 652
            :.:..|..:.:|..||:::||.|.|.:.|...:.  ...|..::|.....|....|.....|..|
Mosquito   598 EDKVYVADNIRDKITPLEVEMAYGLRQNVLGRQRRPRAHTEPVLDQNRGTVQRDAINIQKNCGPD 662

  Fly   653 -VCTADLQLRSKDVSPTYILGSADTLRLNYEITNIGETAYLPQFNVTSTSRLAFAQVPGNCKVVD 716
             ||..||::..|.|. .|:|||.:.|.:...|||.||.|:...|.:...:.|.|.:|....:|.|
Mosquito   663 NVCVPDLRMEVKSVD-DYLLGSNNLLSVEVLITNRGEDAFEAGFYMAVPNGLDFRRVDRLGEVKD 726

  Fly   717 AVMVCDLNRGRPLAKGDTDSVTISFDVSQLSGQSLIIHAEV-----FSTG--------YEQNPTD 768
            ..::|       .|.....:.|:..|:........::|.:|     ||.|        .|.|.|:
Mosquito   727 VPVLC-------TAPSAATNKTLKCDIGNPLSSGKVVHFKVILAPSFSAGMGSSYDFYLETNSTN 784

  Fly   769 -----NRQTNV----IGLKEFTEIDASGGQTNSQIDLEH--YSNSAE----------IVNNYEIK 812
                 |||.||    ||:...|::..||.....|....|  |.:.||          :|:.|||:
Mosquito   785 AELDGNRQDNVMRKTIGILVQTDLAMSGVSLPDQFHYNHSEYKSLAEAKTERDIGPQVVHIYEIR 849

  Fly   813 SNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIINVTSLK-----MQASYDSQL-LSIDLYDQNNTM 871
            :.|||.|::  ..|::...|:......::.::|.....     :...|.:.| |:||......:.
Mosquito   850 NEGPSTIDE--AEFFVLWPYETVDGVPLMYLLNQPETHGNIECLPTEYANPLNLAIDSALARKSF 912

  Fly   872 LVVDPVEVTT-TLSGGLERT 890
            |  |.|.|:: :.|..:.||
Mosquito   913 L--DKVGVSSASYSSSMGRT 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scbNP_523750.2 Int_alpha 51..103 CDD:214549 17/56 (30%)
FG-GAP 350..388 CDD:460357 15/40 (38%)
Int_alpha 409..459 CDD:214549 26/52 (50%)
Int_alpha 473..>515 CDD:214549 15/41 (37%)
Integrin_alpha2 509..829 CDD:462478 90/380 (24%)
ifXP_061518066.1 None

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