DRSC/TRiP Functional Genomics Resources

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Protein Alignment scb and Itga9

DIOPT Version :10

Sequence 1:NP_523750.2 Gene:scb / 36692 FlyBaseID:FBgn0286785 Length:1115 Species:Drosophila melanogaster
Sequence 2:NP_598482.2 Gene:Itga9 / 104099 MGIID:104756 Length:1036 Species:Mus musculus


Alignment Length:1213 Identity:295/1213 - (24%)
Similarity:492/1213 - (40%) Gaps:321/1213 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IFLALLALISHIEAFNF-MPRPSRVINSPKHLKFHINQTRSSYFGYTLV----IRQTSIIVGAPR 70
            :.|||:|......|:|. ..||.| ...|.          .|:|||.::    .....::||||:
Mouse    17 LLLALVAAGVPAGAYNLDAQRPVR-FQGPS----------GSFFGYAVLEHFHDNTRWVLVGAPK 70

  Fly    71 AQSTLESQRTINETGAIYRCSL-TNGVCSPYVLD-SRGNVDAPYSEYTFDSERKDFQWLGGSMDG 133
            |.|...:  ::...||:::|.: ||.......|| :||.........|...:|.| :|:|.|:..
Mouse    71 ADSKYST--SVKSPGAVFKCRVHTNPDRRCTELDMARGRTRGAPCGKTCRGDRDD-EWMGVSLAR 132

  Fly   134 GTKDTDKLLVCAPRFYAPSSRDNHL--HGVCYWVNNTVASTPQHVTRISPLRLKS-------EQV 189
            ..:...::|.||.|:.......:|:  ||.||.:.             |.|:.|.       |:.
Mouse   133 QPRADGRVLACAHRWKNIYYEADHILPHGFCYLIP-------------SNLQAKGKVLIPCYEEY 184

  Fly   190 KE---EDNGNKASFFYIMGELGLSAHVADDNTKFLI--GAPGINTWRGSVILYRQVDPVDNPTAS 249
            |:   |::|:            ..|.:|...|:.|:  ||||...|.|::   :.::..||....
Mouse   185 KKKYGEEHGS------------CQAGIAGFFTEELVVMGAPGSFYWAGTL---KVLNLTDNTYFK 234

  Fly   250 RRDTSKALRRTYRDVDSNDYTPEHYAPEIPTPGLWGQEEDSYFGYAVSSGFFDSSNPTKLLYVAT 314
            ..|.:...||         ||                    |.||||::|.|  |:|:....|..
Mouse   235 LNDEAIMNRR---------YT--------------------YLGYAVTAGHF--SHPSITDVVGG 268

  Fly   315 APQANKQSGEAYIF--DVRGKSIHKYHVFRGEQFGEYFGYSVLAEDLNGDGKTDVIVSAPQHALE 377
            ||| ::..|:.|||  |.|..::.|.....|::.|.|||.|:.|.|||.||.:|::|.||.  ..
Mouse   269 APQ-DEGIGKVYIFRADRRSGTLIKIFQASGKKMGSYFGSSLCAVDLNMDGLSDLLVGAPM--FS 330

  Fly   378 DSHDNGAIYVFINKGFFNFERQI-LRSPVETMARFGTALSRLGDINHDGYNDVAVGAP----FAG 437
            :..|.|.:.|::|:|....|.|: |.......|.||.:::.||||:.||:.|||||||    || 
Mouse   331 EIRDEGQVTVYLNQGHGALEEQLTLTGDAAYNAHFGESIANLGDIDDDGFPDVAVGAPKEEDFA- 394

  Fly   438 NGTVFIYLGSENGLRDQPSQRLDAPSQQPSKYGSHMFGHGLSRGSDIDGNGFNDFAIGAPNAEAV 502
             |.|:||.|..||:..:.|.:|......|:   ..|||..:|.|.|:||||:.|..|||..:::|
Mouse   395 -GAVYIYHGDANGIVPKYSMKLSGRRLNPT---LRMFGQSISGGIDMDGNGYPDVTIGAFLSDSV 455

  Fly   503 YLYRAYPVVKVH------ATVKSESREIKPEQEKV---KITACYR-----------LSTTSTDKL 547
            .|.||.||:.|.      .::...:.:....|:.|   .:|.|:|           |:...|..:
Mouse   456 VLLRARPVITVDVSIFLPGSINITAPQCHDGQQPVNCLNVTVCFRFHGKNVPGEIGLNYNLTADV 520

  Fly   548 VQEQELAIRIAMDKQLKRVKFT---QTQTNEISFKVN-ANFGEQCRDFETQVRYSEKDIFTPIDL 608
            .|:::        .||.||.|.   :| ..::|.::. ::..|.|..:...|:...:|:.:||..
Mouse   521 AQKEK--------GQLPRVYFVLFGET-AGQVSERLQLSHMDEVCHHYVAHVKRRVQDVISPIVF 576

  Fly   609 EMHYELTKKVPDSEEFCETCAIVDPTE-------PKVSTQN-IIFSTGCATDVCTADLQLRSK-- 663
            |..|.|.:.|...|:    ..:.|.|.       .::|.:| .:|...|.::.|.||||||.|  
Mouse   577 EAAYSLDEHVMGEED----RELPDLTPVLRWKKGQRISQKNQTVFERNCQSEDCAADLQLRGKLL 637

  Fly   664 -----DVSPTYILGSADTLRLNYEITNIGETAYLPQFNVTSTSRLAF------AQVPGNCKVVDA 717
                 :.:|...||:...:.||..|:|:|:.||....:...:..|.|      .::..:|:::::
Mouse   638 LSSVDEKTPHLALGAVKNISLNISISNLGDDAYDANVSFNVSRELFFINMWQKEEMGISCELLES 702

  Fly   718 -VMVCDLNRGRPLAKGDTD-SVTISFDVSQLSGQSLIIHAEVFSTGYEQNPTDNRQTNVIGLKEF 780
             .:.|.:  |.|..:..:. ..::.||.|.|||:..|:                         .|
Mouse   703 DFLKCSV--GFPFMRSKSKYEFSVIFDTSHLSGEEEIL-------------------------SF 740

  Fly   781 TEIDASGGQTNSQIDLEHYSNSAEIVNNYEIKSNGPSVIEQLTVSFYIPIAYKVAGSTAIIPIIN 845
            .....||....|:                        .:...|::..:|:.::|  .|:|..|::
Mouse   741 IVTAQSGNLERSE------------------------ALHDNTLTLTVPLVHEV--DTSITGIVS 779

  Fly   846 VTSLKMQASYD-SQLLSIDLYDQNNTMLVVDPVEVTTTLSGGLERTVITQNRQSYDIHTSGHVHQ 909
            .||.....|.| |..:.:|  ||.   ....||.:|.               |.|::..|     
Mouse   780 PTSFVYGESVDASNFIQLD--DQE---CHFQPVNITL---------------QVYNMGPS----- 819

  Fly   910 TMEVLDTSMVATASMSRKRRDLKALTANREQYARISNVKAHDLLSDDFKGKLPVNR--------- 965
               .|..|.|:.:..||      ......|.:      :..|::....||...:.|         
Mouse   820 ---TLPGSSVSISFPSR------LSPGGAEMF------QVQDMVVSQEKGNCSLQRNPTPCIIPQ 869

  Fly   966 -------TI----------VFNCRDPEMTICVRAEMRVHFRPE---KSINLNMRYSVDL--NEVN 1008
                   ||          |.:|..|. :.|:.....:...|:   ::|||.|..:.::  .:.:
Mouse   870 EQENIFHTIFAFFSKSGRKVLDCEKPG-SFCLTLHCNLSALPKEESRTINLYMLLNTEILKKDSS 933

  Fly  1009 AILVDPWEYFVILTDLKLQ--------KKGDPTST--SFSINRRIEPNIISKHQETGLPI-WIII 1062
            :::     .|:....:|::        ..|:|..|  .|.....:||.        |..: |||.
Mouse   934 SVI-----QFMARAKVKVEPALRVVEIANGNPEETLVVFEALHNLEPR--------GYVVGWIIA 985

  Fly  1063 VSVIGGLLLLSAISYLLYKFGFFNRTKKDELDRLVQQNPVEPE 1105
            :|::.|:|:...::.||:|.|||.|..|:.::  .::|..|.|
Mouse   986 ISLLVGILIFLLLAVLLWKMGFFRRRYKEIIE--AEKNRKENE 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scbNP_523750.2 Int_alpha 51..103 CDD:214549 15/56 (27%)
FG-GAP 350..388 CDD:460357 15/37 (41%)
Int_alpha 409..459 CDD:214549 26/53 (49%)
Int_alpha 473..>515 CDD:214549 21/47 (45%)
Integrin_alpha2 509..829 CDD:462478 71/366 (19%)
Itga9NP_598482.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 36..97 19/73 (26%)
Int_alpha 45..102 CDD:214549 15/68 (22%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 109..175 18/79 (23%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 183..233 15/64 (23%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 234..290 24/87 (28%)
Int_alpha 245..295 CDD:214549 22/72 (31%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 291..350 22/60 (37%)
Int_alpha 301..348 CDD:214549 20/48 (42%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 352..409 27/58 (47%)
Int_alpha 362..415 CDD:214549 26/54 (48%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 412..475 24/65 (37%)
Int_alpha 426..>467 CDD:214549 20/40 (50%)
Integrin_alpha2 461..904 CDD:462478 106/549 (19%)
GFFKR motif. /evidence=ECO:0000250|UniProtKB:Q13797 1006..1010 3/3 (100%)

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