DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8079 and Gpatch2l

DIOPT Version :10

Sequence 1:NP_611023.1 Gene:CG8079 / 36689 FlyBaseID:FBgn0034002 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_006516282.1 Gene:Gpatch2l / 70373 MGIID:1917623 Length:487 Species:Mus musculus


Alignment Length:301 Identity:54/301 - (17%)
Similarity:98/301 - (32%) Gaps:96/301 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LKKIKAE-----KQKAKDQAEKSKRKAKKKKSKKHSKKR-------------------------- 247
            :|::.:|     :||.|......:|..:.|.:||....|                          
Mouse   132 VKRVTSEVAASLQQKLKVSDWSYERGCRFKSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSQ 196

  Fly   248 -SKKERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSS-------VPVFK 304
             .:|||.....:..:|..||..::.:...:..|||:...:::|....:.|.|.       ||.|.
Mouse   197 PGRKERMECEAEEQKHGSDENMSECDTSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVPGFT 261

  Fly   305 AAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGAHDVIIPDVNVSKCHLKF 369
            .    .::..|:.|.     ..|.||.:..|           |.:......::|.....:     
Mouse   262 V----HNLLPKWAPD-----HCTEVERMDSG-----------LDKLSDPTFLLPSRPAQR----- 301

  Fly   370 KYENKL-----GIYQCLDLGSRNGTILNGSPMSSDAMDLVHGSVITLGQTRLLCHVHEGNSTCGL 429
            .|..:|     ...:||..|.|.   |.|.          ..|:.:||..|:      |::   :
Mouse   302 GYHGRLNRLPGAAARCLRKGRRR---LPGK----------EASMSSLGTERI------GHT---I 344

  Fly   430 CEPGLLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLE 470
            .:|     .....:.|:||.:.|:.:...:...|...|.|:
Mouse   345 SDP-----RQTEKMRALASGSPSISACVHEFNPLSPLYSLD 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8079NP_611023.1 OCRE_VG5Q 124..177 CDD:293883
OCRE repeat 1 129..136 CDD:293883
OCRE repeat 2 137..144 CDD:293883
OCRE repeat 3 145..152 CDD:293883
OCRE repeat 4 153..159 CDD:293883
OCRE repeat 5 162..169 CDD:293883
FHA_AGGF1 316..433 CDD:438738 20/121 (17%)
G-patch 516..560 CDD:396249
Gpatch2lXP_006516282.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.