| Sequence 1: | NP_611023.1 | Gene: | CG8079 / 36689 | FlyBaseID: | FBgn0034002 | Length: | 601 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038955950.1 | Gene: | Rbm10 / 64510 | RGDID: | 631366 | Length: | 930 | Species: | Rattus norvegicus |
| Alignment Length: | 476 | Identity: | 96/476 - (20%) |
|---|---|---|---|
| Similarity: | 149/476 - (31%) | Gaps: | 185/476 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 127 NLNNFVYEHTSGMYYDPKTGYYYNAEYGLYYDGNNGCYYSYDHAKDSY--EFHSQAQVQANDAAK 189
Fly 190 PESEDEDLEVQFDELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHS---------- 244
Fly 245 ----------------KKRSKKERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDSSS 293
Fly 294 NTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGAHDVIIP 358
Fly 359 DVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDAMDLVHGSVITLGQTRLLCHVHEG 423
Fly 424 NSTCGLCEPGLLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLENE-KFVDTSGNGQSNYND 487
Fly 488 RAATRRVQVGSSTDKEK-------TEVACVNTE------IGSSNKGFKMLSKLGWQKGEKLGKTN 539
Fly 540 ASAGLLEPINVVANEGTSGLG 560 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG8079 | NP_611023.1 | OCRE_VG5Q | 124..177 | CDD:293883 | 17/51 (33%) |
| OCRE repeat 1 | 129..136 | CDD:293883 | 1/6 (17%) | ||
| OCRE repeat 2 | 137..144 | CDD:293883 | 5/6 (83%) | ||
| OCRE repeat 3 | 145..152 | CDD:293883 | 4/6 (67%) | ||
| OCRE repeat 4 | 153..159 | CDD:293883 | 2/5 (40%) | ||
| OCRE repeat 5 | 162..169 | CDD:293883 | 1/6 (17%) | ||
| FHA | 346..411 | CDD:278899 | 5/64 (8%) | ||
| G-patch | 516..560 | CDD:279867 | 15/43 (35%) | ||
| Rbm10 | XP_038955950.1 | RRM | 21..>233 | CDD:223796 | |
| RRM1_RBM10 | 129..212 | CDD:410147 | |||
| ZnF_RBZ | 216..240 | CDD:197784 | |||
| RanBP2-type Zn finger | 218..237 | CDD:275376 | |||
| RRM2_RBM10 | 299..385 | CDD:410148 | |||
| OCRE_RBM10 | 564..627 | CDD:293886 | 18/58 (31%) | ||
| OCRE repeat 1 | 570..577 | CDD:293886 | 1/6 (17%) | ||
| OCRE repeat 2 | 578..585 | CDD:293886 | 5/6 (83%) | ||
| OCRE repeat 3 | 586..593 | CDD:293886 | 4/6 (67%) | ||
| OCRE repeat 4 | 594..600 | CDD:293886 | 2/5 (40%) | ||
| OCRE repeat 5 | 602..609 | CDD:293886 | 1/6 (17%) | ||
| G-patch | 858..902 | CDD:396249 | 17/45 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||