DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11808 and AT1G15930

DIOPT Version :10

Sequence 1:NP_611021.1 Gene:CG11808 / 36687 FlyBaseID:FBgn0034000 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_173045.1 Gene:AT1G15930 / 838163 AraportID:AT1G15930 Length:144 Species:Arabidopsis thaliana


Alignment Length:47 Identity:12/47 - (25%)
Similarity:18/47 - (38%) Gaps:8/47 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 KSRTRDHH-KSRSISQRKTRGP-------SSESNSRSATTPAAAPVK 125
            |:...||. :..::...||.|.       .||.|:|.....:...||
plant    79 KALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVK 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11808NP_611021.1 None
AT1G15930NP_173045.1 Ribosomal_L7Ae 29..124 CDD:426153 10/44 (23%)

Return to query results.
Submit another query.