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Protein Alignment CG11808 and Rpp38
DIOPT Version :9
Sequence 1: | NP_611021.1 |
Gene: | CG11808 / 36687 |
FlyBaseID: | FBgn0034000 |
Length: | 219 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001028235.1 |
Gene: | Rpp38 / 291317 |
RGDID: | 1307474 |
Length: | 272 |
Species: | Rattus norvegicus |
Alignment Length: | 25 |
Identity: | 10/25 - (40%) |
Similarity: | 13/25 - (52%) |
Gaps: | 1/25 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 PSRSSRQVSKPKK-KKAKKSKKYSR 61
|.:..|.|..|.| :|..|||..|:
Rat 248 PLKIKRLVPNPSKIRKPPKSKNPSK 272
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG11808 | NP_611021.1 |
None |
Rpp38 | NP_001028235.1 |
Ribosomal_L7Ae |
100..174 |
CDD:279573 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1358 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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