DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11808 and RPP38

DIOPT Version :9

Sequence 1:NP_611021.1 Gene:CG11808 / 36687 FlyBaseID:FBgn0034000 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001091059.1 Gene:RPP38 / 10557 HGNCID:30329 Length:283 Species:Homo sapiens


Alignment Length:43 Identity:13/43 - (30%)
Similarity:20/43 - (46%) Gaps:4/43 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RDRERDRDRDRERDRERDRDRRHRSKSPSRSSRQVSKPKKKKA 53
            :||..|...:.|.:....:||    :....|...:||||:|.|
Human   209 QDRIEDSGENLETEPLESQDR----ELLDTSFEDLSKPKRKLA 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11808NP_611021.1 None
RPP38NP_001091059.1 Ribosomal_L7Ae 107..185 CDD:396000
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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