DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8093 and Lipn

DIOPT Version :10

Sequence 1:NP_611020.1 Gene:CG8093 / 36686 FlyBaseID:FBgn0033999 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001178884.1 Gene:Lipn / 499345 RGDID:1560354 Length:398 Species:Rattus norvegicus


Alignment Length:407 Identity:129/407 - (31%)
Similarity:202/407 - (49%) Gaps:66/407 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VTTVTIVRG--------------------------HGYEIEEHEVQTSDGYILTMHRIPYSK-NT 66
            :||..::||                          :||..||::|.|:|||||.::|||:.: .|
  Rat     8 LTTACLIRGTLSAGGFFENTVNPEVWMNASEIITYNGYPSEEYDVTTADGYILAINRIPHGRGQT 72

  Fly    67 GYDGPRPVVFLMHGLLCSSSDWVLAGPHSGLAYLLSEAGYDVWMGNARGNTYSKRHASKSPLLQP 131
            |:.||||||::.|.|...::.|:...|:..|.:||::|||||||||:||||:|:||.:.|...:.
  Rat    73 GHAGPRPVVYMQHALFADNAYWLENFPNGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSVNEEK 137

  Fly   132 FWNFEWHDIGIYDLPAMMDYVLYWTNVTQLTYVGHSQGTTSFFVLNSMIPRFKSRIRSAHLLAPV 196
            ||.|.:.::..||||.::|:::..|...:|.::|||.|||..|:..|.:|....||:....|.||
  Rat   138 FWAFSFDEMAKYDLPGIIDFIVNKTGQEKLYFIGHSLGTTIGFIAFSTMPELAQRIKMNFALGPV 202

  Fly   197 AWMEHMESPLATVGGPLLGQPNAFVELFGSAEFLPNTQLMNLFG---------------ALLCSD 246
            ...::..|                  :|.|...||.:.:..:||               ..:|:.
  Rat   203 ISFKYPTS------------------IFTSFFLLPRSMIKLMFGTKGFFLEDKNAKMSYVTVCNK 249

  Fly   247 EAISQFMCTNTLFLLGGWNSPYINETLLPDIMATTPAGCSVNQIFHYLQEYNSGYFRQFDYGS-T 310
            :.:.. ||:..:.|..|:|...:|.:.|...|:..|.|.|:..|.|..|.|.|..||.:|:|| .
  Rat   250 KLLRP-MCSEFMSLWAGFNKKNMNMSRLDVYMSHAPTGSSIQNILHIKQLYQSDEFRAYDWGSEA 313

  Fly   311 RNKKEYSSKTPPEYDVEGIDVPTYLYYSDNDYFASLIDVDRLRYTMNPSALKSAYRMPEEKWNHI 375
            .|...|:...||.||:..:.|||.::...:|...:..||.|:.    |......|.....:|||.
  Rat   314 ENMNHYNQSRPPLYDLTAMKVPTAIWAGGHDVLVTPQDVARIL----PQITNLRYFKQFPEWNHF 374

  Fly   376 DFLWGLNIKEILYDRVI 392
            ||:|||:..:.||.::|
  Rat   375 DFVWGLDAPQRLYSKII 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8093NP_611020.1 PLN02872 9..392 CDD:215470 128/405 (32%)
LipnNP_001178884.1 PLN02872 37..395 CDD:215470 125/378 (33%)

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