DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8093 and Lipo1

DIOPT Version :10

Sequence 1:NP_611020.1 Gene:CG8093 / 36686 FlyBaseID:FBgn0033999 Length:398 Species:Drosophila melanogaster
Sequence 2:XP_006231364.1 Gene:Lipo1 / 294097 RGDID:1565682 Length:397 Species:Rattus norvegicus


Alignment Length:370 Identity:125/370 - (33%)
Similarity:196/370 - (52%) Gaps:15/370 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SSVTTVTIVRGHGYEIEEHEVQTSDGYILTMHRIPYSK-NTGYDGPRPVVFLMHGLLCSSSDWVL 90
            |.:....|::...|...|:||.|.|||||.::|||:.| |.....|:.|||..|||..:...||.
  Rat    29 SHMNVSEIIKYWNYPSLEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLFSTPGVWVA 93

  Fly    91 AGPHSGLAYLLSEAGYDVWMGNARGNTYSKRHASKSPLLQPFWNFEWHDIGIYDLPAMMDYVLYW 155
            ..|.:.||::|:|||||||:||:||:|::|:|.:.||..:.||.|.:..:..|||||.::::|..
  Rat    94 NPPDNSLAFILAEAGYDVWLGNSRGSTWAKKHVTLSPDSEEFWAFSFDQMIAYDLPATINFILNT 158

  Fly   156 TNVTQLTYVGHSQGTTSFFVLNSMIPRFKSRIRSAHLLAPVAWMEHMESPLATVGGPLLG--QPN 218
            |...|:.|:|||.||.......|.......:|:...|:|||..:::::.     .|.||.  .|.
  Rat   159 TGQEQIYYIGHSLGTLIALGAFSTNQELAEKIKLNILIAPVRTVKYVKG-----FGRLLAYFSPE 218

  Fly   219 AFVELFGSAEFLPNTQLMNLFGALLCSDEAISQFMCTNTLFLLGGWNSPYINETLLPDIMATTPA 283
            ||..:||..|||| |.:.:.:...:|:.:.:.. .|...|..|.|::...:|.:.:...:..:.|
  Rat   219 AFKLVFGKKEFLP-TVVFSEYSKYVCNIKLVDA-GCAGVLGSLTGFSEDQLNTSRIDVYITHSLA 281

  Fly   284 GCSVNQIFHYLQEYNSGYFRQFDYGS-TRNKKEYSSKTPPEYDVEGIDVPTYLYYSDNDYFASLI 347
            |.|...:.|..|...||.|:.:|:|| :.|.:.|:..|||.|.||.:.|||.::....|:.|...
  Rat   282 GTSTQILIHAGQAIRSGEFQAYDWGSPSLNMQHYNQTTPPLYSVENMKVPTVMFTGLKDFLADPK 346

  Fly   348 DVDRLRYTMNPSALKSAYRMPEEKWNHIDFLWGLNIKEILYDRVI 392
            ||..|    .|......|.....:::|:||:.|||.|..:.|.::
  Rat   347 DVANL----VPKIFNLIYHKTIPEFSHLDFIVGLNAKTEVSDEIL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8093NP_611020.1 PLN02872 9..392 CDD:215470 125/368 (34%)
Lipo1XP_006231364.1 PLN02872 34..387 CDD:215470 124/363 (34%)

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