DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and Zfp423

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_011246862.1 Gene:Zfp423 / 94187 MGIID:1891217 Length:1312 Species:Mus musculus


Alignment Length:724 Identity:140/724 - (19%)
Similarity:215/724 - (29%) Gaps:280/724 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 TTSSSKSLSKSLIAKGLG------------KKPKEKDEKIPMVIKKE-------EDDLRGLEE-- 709
            |.||||....|:..:|..            ||.||...|.....||:       ||.....||  
Mouse   243 THSSSKPFKCSVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDTFSQTEELE 307

  Fly   710 -----LYYGISDGTD----EYHEIFPYSTPRTVHNELA---KTVECPICLNGDSFDSNEKLQTHL 762
                 |:..:|:..|    ...|:|...:....|...|   :..:||:|  .:.|.|.|.:..||
Mouse   308 KHVLTLHPQLSEKADLQCIHCPEVFVDESTLLAHIHQAHANQKHKCPMC--PEQFSSVEGVYCHL 370

  Fly   763 VSHISPEGKQHQFQCLFCLEKHPTESVLAKHNQIMHPTETKTE--GSPS---------------- 809
            .||..|:...|.      :...|....:|..:.....:....|  .:|.                
Mouse   371 DSHRQPDSSNHS------VSPDPVLGSVASMSSATPDSSASVERGSTPDSTLKPLRGQKKMRDDG 429

  Fly   810 -------YYCLICQQR-HNSLHLLTAHLQKVHSTLELPYWCHSCG---------YRSSSHRDLVR 857
                   |.|..|.:| ..||.:|..||:.:|:  :.|...|:|.         |..:.|   ||
Mouse   430 QSWPKVVYSCPYCSKRDFTSLAVLEIHLKTIHA--DKPQQSHTCQICLDSMPTLYNLNEH---VR 489

  Fly   858 HFYDDHKHQ-------NFLQCPYCLDIFYFSKLGVVNQLRIEHYFMHLDEHINKRD--PSLRCQK 913
            ..:..|.:.       :...|.||.::|     ..:|.|:......|...:.|..|  .:..|.:
Mouse   490 KLHKSHAYPVMQFGNISAFHCNYCPEMF-----ADINSLQEHIRVSHCGPNANPPDGNNAFFCNQ 549

  Fly   914 CSLSFLEKGDLKQHAVQHHVSM--TK---------------------TNRPV--------RLLLN 947
            ||:.||.:..|.:|..|.|.|:  ||                     ||.|:        :.:..
Mouse   550 CSMGFLTESSLTEHIQQAHCSVGSTKLESPVVQPTQSFMEVYSCPYCTNSPIFGSILKLTKHIKE 614

  Fly   948 NSMLIPPPKIRTHHREQPP-----------------------------------------FSTYK 971
            |...||....:....||.|                                         |.|:.
Mouse   615 NHKNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSGSANSISNGEYPCNQCDLKFSNFESFQTHL 679

  Fly   972 RPVFFAFLEGKTCAECNTDFASEE--------------THYTGWLHCVKCNYQ------------ 1010
            :......|..:.|.:|..||.|:|              |||.    |..|:.|            
Mouse   680 KLHLELLLRKQACPQCKEDFDSQESLLQHLTVHYMTTSTHYV----CESCDKQFSSVDDLQKHLL 740

  Fly  1011 ----------TCCERA-----------QFRHGVE--------CNGNF---------VDAMEVNMP 1037
                      |.|:..           ..:|..|        ||.:|         |....:..|
Mouse   741 DMHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKMYRCTACNWDFRKEADLQVHVKHSHLGNP 805

  Fly  1038 QEMH-CI-CGFATGNGNKMAQHLA------NCGLST-----------------CYPSLEAASENA 1077
            .:.| || ||.......::..|:.      ||...:                 |.  .:||:||.
Mouse   806 AKAHKCIFCGETFSTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCV--FDAAAENG 868

  Fly  1078 V----------KRNMLDMLGLVRRD------GETSGEGADISET--ADDVADQSSDMLPPQEDHH 1124
            .          |....|:.|::.::      .|.|.:..|.||.  ..|:...:..|....::|.
Mouse   869 TANGVPPTSTKKAEPADLQGMLLKNPEAPNSHEASEDDVDASEPMYGCDICGAAYTMEVLLQNHR 933

  Fly  1125 LQQHHQQVG 1133
            |:.|:.:.|
Mouse   934 LRDHNIRPG 942

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368 2/20 (10%)
C2H2 Zn finger 812..833 CDD:275368 8/21 (38%)
C2H2 Zn finger 842..858 CDD:275368 5/24 (21%)
Zfp423XP_011246862.1 C2H2 Zn finger 168..188 CDD:275368
C2H2 Zn finger 196..216 CDD:275368
COG5048 222..623 CDD:227381 86/397 (22%)