DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and Zfp423

DIOPT Version :10

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_011246862.1 Gene:Zfp423 / 94187 MGIID:1891217 Length:1312 Species:Mus musculus


Alignment Length:264 Identity:44/264 - (16%)
Similarity:82/264 - (31%) Gaps:86/264 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 NPEGISKMVGLLDDDLLDIITPRLLNNLPNTYAYTKALTEDMVYQYRGKLPIAIARPSIVTAAMK 266
            ||:|            ||.:..:|...      :.|...|::...:....|||:....|.....|
Mouse   469 NPQG------------LDFVQYKLAEK------FVKQGEEEVASHHEAAFPIAVVASGIWMLHPK 515

  Fly   267 EPLPGWGEGTNGPTGLLIGAGRGVIRSMHCNGEYLADFMPVDVTMNAIIAIGTERMANARKEDVM 331
                               .|..::..:|....|...|.|.          ..|.|.....:.::
Mouse   516 -------------------VGDLILAHLHKKCPYSVPFYPA----------FKEGMPLEDYQRML 551

  Fly   332 YYNLTSS----ADNPISWGEVLEMGRGILNQNPFCFALWYPDGS-------------------IK 373
            .|.:|.|    .||      .|:...|::........|.:|.||                   :.
Mouse   552 GYQVTDSKVEQQDN------FLKRMSGMIRLYAAIIQLQWPYGSRQEAHPHGLNHGWRWLAQILN 610

  Fly   374 SNYLYHLLCVVLFHYLPA--------YLIDF-LMVLLRRKPFLVKVQKRISAGLTILQYYTTKEW 429
            ...|..:...:||.:|..        |.:.| .|:||.::.:..:::...|:| .:..:...|::
Mouse   611 MEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEAITSSG-QMGSFIRLKQF 674

  Fly   430 VFRC 433
            :.:|
Mouse   675 LEKC 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368
C2H2 Zn finger 812..833 CDD:275368
C2H2 Zn finger 842..858 CDD:275368
Zfp423XP_011246862.1 C2H2 Zn finger 168..188 CDD:275368
C2H2 Zn finger 196..216 CDD:275368
COG5048 222..623 CDD:227381 32/206 (16%)
C2H2 Zn finger 224..244 CDD:275368
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 293..312 CDD:275368
C2H2 Zn finger 439..460 CDD:275368
C2H2 Zn finger 471..495 CDD:275368 6/41 (15%)
C2H2 Zn finger 510..529 CDD:275368 3/37 (8%)
C2H2 Zn finger 692..712 CDD:275368
C2H2 Zn finger 722..743 CDD:275368
C2H2 Zn finger 750..771 CDD:275368
C2H2 Zn finger 780..801 CDD:275368
C2H2 Zn finger 811..831 CDD:275368
C2H2 Zn finger 837..855 CDD:275368
C2H2 Zn finger 916..937 CDD:275368
C2H2 Zn finger 960..980 CDD:275368
C2H2 Zn finger 989..1009 CDD:275368
C2H2 Zn finger 1228..1248 CDD:275368
C2H2 Zn finger 1259..1280 CDD:275368
C2H2 Zn finger 1289..1305 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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