DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and Zfp438

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_001347376.1 Gene:Zfp438 / 240186 MGIID:2444919 Length:798 Species:Mus musculus


Alignment Length:603 Identity:117/603 - (19%)
Similarity:190/603 - (31%) Gaps:199/603 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 GFKNIVQAAATDNTAKHNNSAVMEYLRRIVPRMF-------------QNTLSLLSRQM---IQQF 528
            |..||............:.|.......::||::.             |.:|:|:.:.:   .|.:
Mouse    13 GESNIRSGTTQSGKTLQSKSQFRTIAPKVVPKVLTSRVLPCPSSISDQGSLTLMPKPLGMPTQNY 77

  Fly   529 -LDELVWRESFGTYALQAFNNII-IHIAEQTRVTTNETITQRLYQVATNPFKDWSILPANYKETP 591
             |.::..:|  ||::|.||.|:. ....::.|::|:|                            
Mouse    78 ALMQVAGQE--GTFSLVAFPNVASAQPVQKPRMSTHE---------------------------- 112

  Fly   592 ANAAPKRLKKPINDADYVVSNKIPKKEKDRDIASSGVKRGRPPNA-----LGTPPPQLP------ 645
                  .||.||.....:.|..:.||:   |::|.......||..     |.:.|...|      
Mouse   113 ------NLKLPIPRYQPLSSQGLRKKQ---DLSSPKSGSSDPPGPSQLCHLTSSPQAYPDPHHKP 168

  Fly   646 --IKKGPGRPPGSTNQT---------KGDRA------------------TT---SSSKSLSKSLI 678
              .|:.|...|..||..         :||.:                  ||   ||.:||..|:.
Mouse   169 SLWKQMPTLNPSPTNINTATLTSGVGQGDLSPLVTNSCGDLELSAMPVYTTEDSSSQQSLPASMQ 233

  Fly   679 AKGLGKK-----PKEKDEKIPMVIKKEEDDLRGLEELYYGISDGTDEYHEIFPYSTPRTVHNELA 738
            ..|..:|     |....|::...:...:..|....:|...:..|.   ..|.|  .||....|:.
Mouse   234 KAGCARKEAPTTPAIASEELKEQLASAQTVLSSAVQLLSVVPKGK---LPILP--LPRVKTTEVG 293

  Fly   739 KTVE-----CPICLNGDSFDSNEKLQ--------THLVSHISP--EGKQHQFQCLFC-------- 780
            | ||     ..:.|:|...:.:|:|.        |.:.|.|:.  ..||...:..||        
Mouse   294 K-VESDADNAELSLSGCRANCDERLSITEGFDAATEIASKIAALHGSKQSACESAFCPVTKLDLS 357

  Fly   781 LEKHPTESVLAKHNQIMHPTETKTEGSPSYYCLI--C----QQRHNS------------------ 821
            .:..|:..:..:..:...|.|..........|:|  |    ::..||                  
Mouse   358 HKAKPSSGIKRRGRKWKVPDEILALQGKRRKCIIGMCGDGIERARNSPQEARDQKPRVASRKYRN 422

  Fly   822 --------------LHLLTAHLQKVHSTL-------ELPYWCHSCGYRSSS---HRDLVRHFYDD 862
                          |...||.|.:..|:|       .||..|.......||   ...::|:.:..
Mouse   423 IMPKPVLVLSALAPLASHTAVLSQAPSSLGQDVLNNALPSKCLGSKQSDSSTPKPSSVLRNGFSG 487

  Fly   863 HKHQNFLQCPYCLDIFYFSKLGVVNQLRIEHYFMHLDEHINKRDPSLRCQKCSLSFLEKGDLKQH 927
            .| :.:..||.|...|.|.          .|...|::.|.|:|..|  |..|..:::..|.|..|
Mouse   488 IK-KPWHMCPVCNYHFQFK----------HHLLDHMNTHTNRRPYS--CGICRKTYVRPGSLSAH 539

  Fly   928 AVQHHVSMTKTNRPVRLL 945
            ...||    ..|.|.:|:
Mouse   540 MKLHH----GDNHPKKLV 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368 3/28 (11%)
C2H2 Zn finger 812..833 CDD:275368 9/58 (16%)
C2H2 Zn finger 842..858 CDD:275368 3/18 (17%)
Zfp438NP_001347376.1 C2H2 Zn finger 495..515 CDD:275368 7/29 (24%)
zf-H2C2_2 507..532 CDD:372612 8/26 (31%)
zf-C2H2 521..543 CDD:333835 6/23 (26%)
C2H2 Zn finger 523..543 CDD:275368 5/19 (26%)
C2H2 Zn finger 554..573 CDD:275368 117/603 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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