DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and C04F5.9

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_504371.1 Gene:C04F5.9 / 178899 WormBaseID:WBGene00015451 Length:534 Species:Caenorhabditis elegans


Alignment Length:302 Identity:63/302 - (20%)
Similarity:88/302 - (29%) Gaps:109/302 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 LAKTVECPICLNGDSFDSNEKLQTHLVSHISPEGKQHQFQCLFC---------LEKHPTESVLAK 792
            :||...||.||....|.|  |||.||.:|:...|   .:.|..|         |..|...| .||
 Worm     1 MAKDHRCPQCLLEFPFAS--KLQRHLETHLITGG---DWLCGLCDTLFNRSSSLTNHWRNS-CAK 59

  Fly   793 HNQIMHPTETK---------------------TEGSP-------SY---------YCLICQ---- 816
            ........|.|                     :|.||       ||         .|:.|.    
 Worm    60 VKMAFCDDELKEMLVYDLREAVFRMTLDHYSASEKSPEEPGTSSSYKTASDDKTSICIYCNLLMP 124

  Fly   817 ----QRHNSLHLLTAHLQKVHSTLELPYWCHSCG----YRSSSHR-------DLVRHFYDDHKHQ 866
                ..|.|:|.......::.....:||.|..||    |:.|.:.       :::.||.|....:
 Worm   125 RGTLHHHYSVHTGRCCPAEITQNSVVPYVCDLCGFGFRYKKSLYNHWRHKCTEVLAHFPDGGNIE 189

  Fly   867 NFLQCPYCLDIFYFSKLGVVNQLRI-----------------------EHYFMH---------LD 899
            |........|:  ..:..|:|.:.:                       ..||..         .|
 Worm   190 NQELNVMVEDL--VKRAEVINPIELPSKRDGEDIEKEDSGDIDDDEETSPYFTAPITALSFDLQD 252

  Fly   900 EHINKRDPSLRCQKCSLSFLEKGDLKQHAVQHHVSMTKTNRP 941
            .::.....:..|.||:..|...|.|.||....|    .|.||
 Worm   253 WNVENVSSTEECPKCNRYFHSLGRLDQHTHAFH----GTARP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368 7/29 (24%)
C2H2 Zn finger 812..833 CDD:275368 5/28 (18%)
C2H2 Zn finger 842..858 CDD:275368 5/26 (19%)
C04F5.9NP_504371.1 C2H2 Zn finger 7..27 CDD:275368 11/21 (52%)
C2H2 Zn finger 36..54 CDD:275368 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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