DRSC/TRiP Functional Genomics Resources

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Protein Alignment row and ztf-1

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_498942.1 Gene:ztf-1 / 176236 WormBaseID:WBGene00018833 Length:582 Species:Caenorhabditis elegans


Alignment Length:360 Identity:77/360 - (21%)
Similarity:122/360 - (33%) Gaps:88/360 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   625 SSGVKRGRPPNALGTPPPQLPIKKGPGRPPGSTNQTKGDRATTSSSKSLSKSLIAKGLGKKPKEK 689
            |..::.|.|     :|||  ||....|:.....|..:.....|.|.:.:..        ||....
 Worm     2 SEALETGDP-----SPPP--PIVSENGKTYYYLNSQESQAPNTPSPQEVPP--------KKMTNL 51

  Fly   690 DEKIPMVIKKEEDDLRGLEE----LYYGISDGTDEYHEIF------------------PYSTPRT 732
            .|..|:|.:....|:..:.|    .:|..........|:|                  ||.|..|
 Worm    52 FESGPLVYEDVAADIEAVTERASRRHYENKMVVKNSREMFDNVNILPDGRYYCCLCNRPYKTHAT 116

  Fly   733 V-------HNELAKTVECPICLNGDSFDSNEKLQTHLVSHISPEGKQHQFQCLFCLEK------- 783
            :       |.....:.:.|.| |..||...|| :.|..:|...:.:::..:.:...||       
 Worm   117 LTAHLRGYHLRNESSCDEPGC-NFLSFTDQEK-KRHRRTHDKKKKERNSQESMVIHEKIQKAVRR 179

  Fly   784 --HPTESVLAKH----NQIMHPTETKT-EGSPSYYCLICQQR-HNSLHLLTAHLQKVHSTLELPY 840
              :|.|..|..|    .::.....|.| :|...|.||.|... .|:.|  .|...::|:  :.|.
 Worm   180 LDYPGEDELRDHLNGSTEVQGTIRTMTKKGKIRYACLKCPHSVFNAYH--AARHVEMHN--DFPK 240

  Fly   841 WCHSCGYRSSSHRDLVRHFYDDHKHQNF--LQCPYCLDIFYFSKLGVVNQLRIEHYFM---HLDE 900
            .|..||.......||..|:...|||:..  .:|..|             .||.....:   |::.
 Worm   241 NCFYCGEIRKGTVDLQVHYMRVHKHEGIRTFKCSVC-------------HLRFTTTILFRDHVEC 292

  Fly   901 HINKRDPSLRCQKCSLSFLEKG----DLKQHAVQH 931
            ....::|.:| |......|.:|    ||.|..:|:
 Worm   293 ENGCQNPEIR-QDIYYGELPEGTIVDDLTQDRLQN 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368 6/33 (18%)
C2H2 Zn finger 812..833 CDD:275368 6/21 (29%)
C2H2 Zn finger 842..858 CDD:275368 5/15 (33%)
ztf-1NP_498942.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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