DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment row and znf423

DIOPT Version :9

Sequence 1:NP_001260992.1 Gene:row / 36685 FlyBaseID:FBgn0033998 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_002937417.2 Gene:znf423 / 100491000 XenbaseID:XB-GENE-490169 Length:1289 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rowNP_001260992.1 C2H2 Zn finger 777..798 CDD:275368
C2H2 Zn finger 812..833 CDD:275368
C2H2 Zn finger 842..858 CDD:275368
znf423XP_002937417.2 COG5048 <141..246 CDD:227381
C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..190 CDD:275368
COG5048 196..601 CDD:227381
C2H2 Zn finger 198..218 CDD:275368
C2H2 Zn finger 226..246 CDD:275368
C2H2 Zn finger 267..286 CDD:275368
C2H2 Zn finger 299..316 CDD:275368
C2H2 Zn finger 417..438 CDD:275368
C2H2 Zn finger 449..470 CDD:275368
C2H2 Zn finger 488..509 CDD:275368
C2H2 Zn finger 525..546 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 670..690 CDD:275368
C2H2 Zn finger 700..717 CDD:275368
C2H2 Zn finger 728..749 CDD:275368
C2H2 Zn finger 758..779 CDD:275368
C2H2 Zn finger 789..809 CDD:275368
C2H2 Zn finger 815..833 CDD:275368
C2H2 Zn finger 893..914 CDD:275368
C2H2 Zn finger 937..957 CDD:275368
C2H2 Zn finger 966..986 CDD:275368
C2H2 Zn finger 1205..1225 CDD:275368
C2H2 Zn finger 1236..1257 CDD:275368
C2H2 Zn finger 1266..1282 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.